RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 hCG_1818297A0A087WSY0 165 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 TK2O00142 265 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 PLIN3O60664 434 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 PTTG1O95997 202 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 PTPN7P35236 360 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 CAPGP40121 348 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 SLC26A3P40879 764 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 ECE1P42892 770 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 GCLMP48507 274 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 MFAP3P55082 362 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 MPP1Q00013 466 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 RAD51Q06609 339 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 ERAP2Q6P179 960 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 SLC9A9Q8IVB4 645 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 LGI2Q8N0V4 545 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 POC5Q8NA72 575 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 KCNN2Q9H2S1 579 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 ZNF385DQ9H6B1 395 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
MSH2-201ENST00000233146 PIK3R2O00459 728 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 TRDMT1O14717 391 aaKnown RBP13.19□□□□□ -0.3
MSH2-201ENST00000233146 NRP1O14786 923 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 GSTM2P28161 218 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 HTR1BP28222 390 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 CBLBQ13191 982 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 SNTA1Q13424 505 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 C1orf220Q5T0J3 134 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 N4BP2L1Q5TBK1 243 aaPredicted RBP13.19□□□□□ -0.3
MSH2-201ENST00000233146 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
MSH2-201ENST00000233146 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 PSMA8Q8TAA3 256 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 PBXIP1Q96AQ6 731 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 ASB2Q96Q27 587 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 GON7Q9BXV9 100 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 LRRC40Q9H9A6 602 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 MRPL40Q9NQ50 206 aaKnown RBP13.19□□□□□ -0.3
MSH2-201ENST00000233146 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 AP3M1Q9Y2T2 418 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 VWA7Q9Y334 891 aa13.19□□□□□ -0.3
MSH2-201ENST00000233146 MYH9P35579 1960 aaKnown RBP13.19□□□□□ -0.3
MSH2-201ENST00000233146 MEN1O00255 615 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 NDUFS2O75306 463 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 USP12O75317 370 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 AMHP03971 560 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 KRT1P04264 644 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 BMP1P13497 986 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 HTR2BP41595 481 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 DSC3Q14574 896 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 C2CD6Q53TS8 623 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 Q5BKY6 102 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 KRT39Q6A163 491 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 ADGRG5Q8IZF4 528 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 GLMNQ92990 594 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 RPRD1BQ9NQG5 326 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 ABCB10Q9NRK6 738 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 EGFRP00533 1210 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 GCP02774 474 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CSH1P0DML2 217 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CSH2P0DML3 217 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 ZNF181Q2M3W8 571 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CYBRD1Q53TN4 286 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CATSPEREQ5SY80 951 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 DHRSXQ8N5I4 330 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 TP53I13Q8NBR0 393 aaPredicted RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 CPA5Q8WXQ8 436 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 C17orf62Q9BQA9 187 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 PLAC1Q9HBJ0 212 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 TOR4AQ9NXH8 423 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 WBP11Q9Y2W2 641 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 PCDHB12Q9Y5F1 795 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 PCDHGA7Q9Y5G6 932 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 UBE4BO95155 1302 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 FAM25EA8MYX2 175 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 ATP6V1G2-DDX39BF2Z307 99 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 B4GAT1O43505 415 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 TCF4P15884 667 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 VAMP7P51809 220 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CHRNDQ07001 517 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 SPIRE1Q08AE8 756 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 DALRD3Q5D0E6 543 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CCDC103Q8IW40 242 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 CNTD1Q8N815 330 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 ZNF781Q8N8C0 355 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 TOE1Q96GM8 510 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 C2orf40Q9H1Z8 148 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 RIOX1Q9H6W3 641 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 PAQR5Q9NXK6 330 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms