RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ARHGAP9Q9BRR9 750 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 UGT2B28Q9BY64 529 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 TCF7L2Q9NQB0 619 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 AP3M1Q9Y2T2 418 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 PCDHGB3Q9Y5G1 929 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SESN1Q9Y6P5 492 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 TPP2P29144 1249 aaPredicted RBP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SP2Q02086 613 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ILF3Q12906 894 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 LRRC49Q8IUZ0 686 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ALLCQ8N6M5 410 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ZNF563Q8TA94 476 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 CYP2W1Q8TAV3 490 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SPPL2BQ8TCT7 592 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 HEXDCQ8WVB3 486 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 IPCEF1Q8WWN9 437 aaPredicted RBP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SLC4A5Q9BY07 1137 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 BPIFA1Q9NP55 256 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 VPS45Q9NRW7 570 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 MRPL39Q9NYK5 338 aaKnown RBP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 MAT2BQ9NZL9 334 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ERVW-1Q9UQF0 538 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 PTPRMP28827 1452 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 TMEM150BA6NC51 233 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 IDSP22304 550 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 CES1P23141 567 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 GSSP48637 474 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ITGA1P56199 1179 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SH3BP5LQ7L8J4 393 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 GPR141Q7Z602 305 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 C5orf34Q96MH7 638 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 APOL4Q9BPW4 351 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 KIFC1Q9BW19 673 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 CEP44Q9C0F1 390 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 TMEM216Q9P0N5 145 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 HCN3Q9P1Z3 774 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 CROTQ9UKG9 612 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 PCDHB11Q9Y5F2 797 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 TOP3BO95985 862 aaKnown RBP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 MYBPC1Q00872 1141 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ELP6Q0PNE2 266 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ITGADQ13349 1161 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 FAM110CQ1W6H9 321 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 MPPE1Q53F39 396 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SDHAF4Q5VUM1 108 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 MAP4K3Q8IVH8 894 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 OR8H2Q8N162 312 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 KIF2BQ8N4N8 673 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 TC2NQ8N9U0 490 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 OR10H5Q8NGA6 315 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SUN3Q8TAQ9 357 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SIKE1Q9BRV8 207 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 ADAM28Q9UKQ2 775 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 HBS1LQ9Y450 684 aaKnown RBP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 PTCH2Q9Y6C5 1203 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 KCNE2Q9Y6J6 123 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 C15orf38-AP3S2A0A0A6YYH1 394 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 BIRC5O15392 142 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 ATP6V1B1P15313 513 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 FASP25445 335 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 USP4Q13107 963 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 PARP6Q2NL67 630 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 XKR6Q5GH73 641 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 PCID2Q5JVF3 399 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 CES3Q6UWW8 571 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 PLPPR4Q7Z2D5 763 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 ARPINQ7Z6K5 226 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 PEX5LQ8IYB4 626 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 TTC29Q8NA56 475 aaPredicted RBP10.66□□□□□ -0.7
TRPS1-201ENST00000220888 CLCC1Q96S66 551 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 BDH2Q9BUT1 245 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 KLHL31Q9H511 634 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 POMKQ9H5K3 350 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 FAM105AQ9NUU6 356 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 DNAJC11Q9NVH1 559 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 AGO1Q9UL18 857 aaKnown RBP10.66□□□□□ -0.7
TRPS1-201ENST00000220888 INVSQ9Y283 1065 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 FAM86B1E9PN63 330 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 FSBPO95073 299 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 NTRK1P04629 796 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 FAM86B2P0C5J1 330 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 MIPP30301 263 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 MSLNQ13421 630 aaPredicted RBP10.66□□□□□ -0.7
TRPS1-201ENST00000220888 FASTKQ14296 549 aaKnown RBP10.66□□□□□ -0.7
TRPS1-201ENST00000220888 NDUFAF6Q330K2 333 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 TRIQKQ629K1 86 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 ZBTB49Q6ZSB9 765 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 ARMC8Q8IUR7 673 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 TIFAQ96CG3 184 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 SEMA3CQ99985 751 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 C11orf84Q9BUA3 381 aaPredicted RBP10.66□□□□□ -0.7
TRPS1-201ENST00000220888 SEMA4BQ9NPR2 832 aaPredicted RBP10.66□□□□□ -0.7
TRPS1-201ENST00000220888 SERPINE1P05121 402 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 PSMB9P28065 219 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 ELK3P41970 407 aa10.66□□□□□ -0.7
TRPS1-201ENST00000220888 NAB1Q13506 487 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms