RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SNAPC2Q13487 334 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 NOL9Q5SY16 702 aaKnown RBP15.3■□□□□ 0.04
EFNB1-201ENST00000204961 TAC4Q86UU9 113 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 PIM3Q86V86 326 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 PAF1Q8N7H5 531 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 SLC16A10Q8TF71 515 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 TINF2Q9BSI4 451 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 POMKQ9H5K3 350 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 RHBDL2Q9NX52 303 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 ACTL7AQ9Y615 435 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 LTBP3Q9NS15 1303 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 DPYSL4O14531 572 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 BIRC5O15392 142 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 PRSS56P0CW18 603 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 MAGEA3P43357 314 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 CYLC2Q14093 348 aaPredicted RBP15.3■□□□□ 0.04
EFNB1-201ENST00000204961 OLFML2BQ68BL8 750 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 GATA6Q92908 595 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 RTP4Q96DX8 246 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 CPNE1Q99829 537 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 TNFRSF12AQ9NP84 129 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 NT5MQ9NPB1 228 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 EGFL7Q9UHF1 273 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 PRG3Q9Y2Y8 225 aaPredicted RBP15.3■□□□□ 0.04
EFNB1-201ENST00000204961 CDY2AQ9Y6F7 541 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 CDY1Q9Y6F8 540 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 PAPPA2Q9BXP8 1791 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 SUPT7LO94864 414 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 PDAP1Q13442 181 aaKnown RBP15.29■□□□□ 0.04
EFNB1-201ENST00000204961 CNPY1Q3B7I2 92 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 FASTKD5Q7L8L6 764 aaKnown RBP15.29■□□□□ 0.04
EFNB1-201ENST00000204961 ARCQ7LC44 396 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 TLK2Q86UE8 772 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 FBXW8Q8N3Y1 598 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 ZNF560Q96MR9 790 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 OLFM3Q96PB7 478 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 ADAMTS10Q9H324 1103 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 ABI2Q9NYB9 513 aaPredicted RBP15.29■□□□□ 0.04
EFNB1-201ENST00000204961 PPME1Q9Y570 386 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 FAM95CA0A1B0GW59 222 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 PTGESO14684 152 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 DLX3O60479 287 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 GPR32O75388 356 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 ITGB1P05556 798 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 GRIK1P39086 918 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 LIMK2P53671 638 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 CEACAM7Q14002 265 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 FAM35AQ86V20 835 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 ST13P4Q8IZP2 240 aaPredicted RBP15.29■□□□□ 0.04
EFNB1-201ENST00000204961 SREK1Q8WXA9 508 aaKnown RBP15.29■□□□□ 0.04
EFNB1-201ENST00000204961 EXOC2Q96KP1 924 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 WDR41Q9HAD4 459 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 USP3Q9Y6I4 520 aa15.29■□□□□ 0.04
EFNB1-201ENST00000204961 C5orf42Q9H799 3197 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 FOXD2O60548 495 aaPredicted RBP15.28■□□□□ 0.04
EFNB1-201ENST00000204961 DPP6P42658 865 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 MFSD10Q14728 455 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 TLR1Q15399 786 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 DCAF4L1Q3SXM0 396 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 LRRC8EQ6NSJ5 796 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ACAD11Q709F0 780 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ATPAF2Q8N5M1 289 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 KYQ8NBH2 561 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ZMIZ2Q8NF64 920 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 CEP70Q8NHQ1 597 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ZNF419Q96HQ0 510 aaPredicted RBP15.28■□□□□ 0.04
EFNB1-201ENST00000204961 MAML3Q96JK9 1138 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 NPY6RQ99463 290 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ACOT9Q9Y305 439 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 SETSIPP0DME0 302 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 AOC1P19801 751 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 GRK2P25098 689 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 RPL14P50914 215 aaKnown RBP15.28■□□□□ 0.04
EFNB1-201ENST00000204961 SV2CQ496J9 727 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 FSCBQ5H9T9 825 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 GRTP1Q5TC63 336 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 RAB3IL1Q8TBN0 382 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 EME1Q96AY2 570 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ANKRD27Q96NW4 1050 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 FRMD8Q9BZ67 464 aaPredicted RBP15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ALG9Q9H6U8 611 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 TMLHEQ9NVH6 421 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 CXCL11O14625 94 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 AP2A1O95782 977 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 CLIC3O95833 236 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 TSHRP16473 764 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 PSMC3P17980 439 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 CHRM3P20309 590 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 GPR15P49685 360 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 KIF19Q2TAC6 998 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 ARL13BQ3SXY8 428 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 FUT11Q495W5 492 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 BNC2Q6ZN30 1099 aaPredicted RBP15.28■□□□□ 0.04
EFNB1-201ENST00000204961 MFSD6LQ8IWD5 586 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 NUP93Q8N1F7 819 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 MYO1HQ8N1T3 1032 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
EFNB1-201ENST00000204961 MYLPFQ96A32 169 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 PKP2Q99959 881 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 MMADHCQ9H3L0 296 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms