RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ADAM32Q8TC27 787 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 SLC24A3Q9HC58 644 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 PACSIN3Q9UKS6 424 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 RAD17O75943 681 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 ATP12AP54707 1039 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 GALNTL6Q49A17 601 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF280DQ6N043 979 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 GPAT2Q6NUI2 795 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 POMGNT2Q8NAT1 580 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 RAB2BQ8WUD1 216 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 TDRD1Q9BXT4 1180 aaKnown RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 MINPP1Q9UNW1 487 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 RGSL1A5PLK6 1076 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 OTCP00480 354 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 LCP1P13796 627 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 SERPINA4P29622 427 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 ADORA1P30542 326 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 MLH1P40692 756 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 ELP6Q0PNE2 266 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 CAMK1Q14012 370 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 SWI5Q1ZZU3 235 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF57Q68EA5 555 aaPredicted RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 MTSS1LQ765P7 747 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 SVOPLQ8N434 492 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 ROPN1LQ96C74 230 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 MXRA8Q9BRK3 442 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 CYLDQ9NQC7 956 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 MCUBQ9NWR8 336 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 GNEQ9Y223 722 aaKnown RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 FAM20BO75063 409 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 CCNE2O96020 404 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 THP07101 528 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 GLI1P08151 1106 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 DDR1Q08345 913 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 QRICH1Q2TAL8 776 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 NT5DC3Q86UY8 548 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 KCNMB4Q86W47 210 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 MEIOBQ8N635 442 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 OR6J1Q8NGC5 347 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 FAM81AQ8TBF8 368 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 SGF29Q96ES7 293 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 BTBD9Q96Q07 612 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 AFF4Q9UHB7 1163 aaKnown RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 NR2E1Q9Y466 385 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHB12Q9Y5F1 795 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 TDRD6O60522 2096 aaKnown RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 NALCNQ8IZF0 1738 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 BRWD1Q9NSI6 2320 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 M0QYT0 321 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 UNC5CO95185 931 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 IGSF6O95976 241 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FGRP09769 529 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CDH5P33151 784 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SREBF1P36956 1147 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 RPL14P50914 215 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ILF3Q12906 894 aaKnown RBP eCLIP6.14□□□□□ -1.432e-6■■□□□ 13
VPS13D-201ENST00000011700 C5orf22Q49AR2 442 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 LCN1P1Q5VSP4 162 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CHSY1Q86X52 802 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CFL2Q9Y281 166 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 NCKAP1Q9Y2A7 1128 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 MTF2Q9Y483 593 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 NPHP3-ACAD11A0A0J9YXS1 232 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ATP6V1G2O95670 118 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 IFNA7P01567 189 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ACADMP11310 421 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ADORA2BP29275 332 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 IL5RAQ01344 420 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PKP1Q13835 747 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CYP20A1Q6UW02 462 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 IPMKQ8NFU5 416 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 EEF2KMTQ96G04 330 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ZIM3Q96PE6 472 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ROGDIQ9GZN7 287 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 VPS4AQ9UN37 437 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 RPP38P78345 283 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TMC3Q7Z5M5 1100 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TMEM17Q86X19 198 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 GPRC5AQ8NFJ5 357 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 HAVCR2Q8TDQ0 301 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FKBP10Q96AY3 582 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PRICKLE1Q96MT3 831 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SLC9A7Q96T83 725 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 POLR1EQ9GZS1 481 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TMEM117Q9H0C3 514 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 KCTD10Q9H3F6 313 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHB16Q9NRJ7 776 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 DNAJC28Q9NX36 388 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PEX16Q9Y5Y5 336 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 GAKO14976 1311 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 VNN2O95498 520 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PSMD5Q16401 504 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PTPN21Q16825 1174 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PTPROQ16827 1216 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ZHX1-C8orf76Q96EF9 292 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 GLT1D1Q96MS3 346 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ZFYVE28Q9HCC9 887 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CMTM6Q9NX76 183 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PRELID1Q9Y255 219 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms