RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Tcf7l2Q924A0 459 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Lysmd3Q99LE3 305 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ecrg4Q99LS0 148 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 4930550L24RikQ99PA7 320 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Arl8bQ9CQW2 186 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Zfp655Q9CZP3 541 aaKnown RBP13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 CenpsQ9D084 142 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Dnajb4Q9D832 337 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 EtfbQ9DCW4 255 aaKnown RBP13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 MycbpQ9EQS3 103 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 MkksQ9JI70 570 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 RalbQ9JIW9 206 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Wdr54Q9R0D8 334 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Shcbp1Q9Z179 668 aa13.54□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 4930469K13RikA0A286YDB2 92 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Serpinb3cA2RSF9 386 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Pate3B3GLJ3 98 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Kctd18E0CZ26 429 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Spata31E9QAF0 1014 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Olfr1022L7MTT3 315 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sema3aO08665 772 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 BhmtO35490 407 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Scd1P13516 355 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Lsp1P19973 330 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gja8P28236 440 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 LdlrP35951 862 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Mapkapk2P49138 386 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Atp6v0d1P51863 351 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Abce1P61222 599 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 UtyP79457 1212 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Kcnc2Q14B80 642 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tespa1Q3U132 458 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Serac1Q3U213 654 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Afg1lQ3V384 480 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Grm6Q5NCH9 871 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Fzd6Q61089 709 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Chi3l1Q61362 389 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Itih1Q61702 907 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sept10Q8C650 452 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sept8Q8CHH9 429 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Brd8Q8R3B7 951 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Imp4Q8VHZ7 291 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Zcchc14Q8VIG0 956 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Fbxo32Q9CPU7 355 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 CinpQ9D0V8 212 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Armc9Q9D2I5 817 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Il1rl2Q9ERS7 574 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 CenpkQ9ESN5 271 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Trpc4Q9QUQ5 974 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Chrna6Q9R0W9 494 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 ClcnkbQ9WUB6 687 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Atg2aQ6P4T0 1914 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Klhl41A2AUC9 606 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Kifc5bE9PUA5 672 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gm10250G3X9L6 160 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tekt5G5E8A8 557 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Olfr603L7N1Y4 312 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ebf2O08792 575 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ppef1O35655 650 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Prl3b1P09586 222 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Krt6aP50446 553 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 PctpP53808 214 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sec31bQ3TZ89 1158 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Hbq1bQ3U0A6 142 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Lmf1Q3U3R4 574 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Myo1gQ5SUA5 1024 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Arcn1Q5XJY5 511 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 ScinQ60604 715 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 DgkqQ6P5E8 934 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tas2r109Q7M707 316 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Metap1Q8BP48 386 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Bend5Q8C6D4 421 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Lrif1Q8CDD9 755 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gm5591Q8CDK1 855 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tfb1mQ8JZM0 345 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Klhl2Q8JZP3 593 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Zbtb44Q8R0A2 453 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Olfr348Q8VGK3 313 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 ChiaQ91XA9 473 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Mphosph6Q9D1Q1 161 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Atp5hQ9DCX2 161 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 SgshQ9EQ08 502 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 GraspQ9JJA9 392 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 PolhQ9JJN0 694 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Adamts5Q9R001 930 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sept6Q9R1T4 434 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tle6Q9WVB3 581 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Padi3Q9Z184 664 aa13.53□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 PtprfA2A8L5 1898 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Usp51B1AY15 661 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Znf518bB2RRE4 1077 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 EsrraO08580 422 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ctbp1O88712 441 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Dnmt3cP0DOY1 709 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Mnat1P51949 309 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 PolgP54099 1218 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Usp46P62069 366 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 March5Q3KNM2 278 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Foxred2Q3USW5 665 aa13.52□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Nfe2l2Q60795 597 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms