RNA–Protein interactions for RNA: ENSMUST00000117548.1

Hmgb1-ps2-201, mousemouse

BASIC

Gene Hmgb1-ps2, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps2-201ENSMUST00000117548 Cd209eQ91ZW7 208 aa4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Cd2bp2Q9CWK3 342 aaKnown RBP4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Cysrt1Q9D1E4 142 aa4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Chordc1Q9D1P4 331 aaKnown RBP4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Nmrk2Q9D7C9 195 aa4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Opn4Q9QXZ9 521 aa4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 GdaQ9R111 454 aa4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 PtpruB1AUH1 1446 aa4.37□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 4930407I10RikD3Z5T8 1512 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Abca14E9Q8F8 1683 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gprin2D3Z1D7 455 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Npc1O35604 1277 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Slc32a1O35633 525 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Mmp8O70138 465 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Mkln1O89050 735 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Psmd3P14685 530 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Kcna3P16390 528 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 AcheP21836 614 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Klkb1P26262 638 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 AdprhP54923 362 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Sh3bp1P55194 680 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Rce1P57791 329 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Psmc6P62334 389 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 CiitaP79621 1155 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gbp10Q000W5 611 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Crisp3Q03402 241 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Zc3h18Q0P678 948 aaKnown RBP4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Cdkl5Q3UTQ8 938 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Cldn34b4Q3V0X2 211 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Timm8a2Q4FZG7 97 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Cd53Q61451 219 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gpank1Q61858 372 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 ShhQ62226 437 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Il11ra1Q64385 432 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Galnt2Q6PB93 570 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Peg10Q7TN75 958 aaKnown RBP4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Sdr16c5Q7TQA3 309 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Wfikkn2Q7TQN3 571 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Rnaseh2bQ80ZV0 308 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Arl15Q8BGR6 204 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gpt2Q8BGT5 522 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Ankrd9Q8BH83 326 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Tmem108Q8BHE4 574 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Rspo4Q8BJ73 228 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Edem2Q8BJT9 577 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Catsper4Q8BVN3 442 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 MaelQ8BVN9 434 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 ScaiQ8C8N2 606 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Calhm6Q8C9E8 313 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Parp9Q8CAS9 866 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Actl9Q8CG27 415 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Klk15Q8CGR4 254 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gm9821Q8K076 103 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Q8K207 121 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 HyiQ8R1F5 277 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gfm2Q8R2Q4 779 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Agap3Q8VHH5 910 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Socs4Q91ZA6 436 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Zmat2Q9CPW7 199 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Lamtor5Q9D1L9 91 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Zbtb43Q9DAI4 467 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Slco1c1Q9ERB5 715 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 GsdmaQ9EST1 446 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Stk4Q9JI11 487 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Spry1Q9QXV9 313 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Tnfsf13bQ9WU72 309 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Ttc41Q692V3 1318 aa4.36□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Olfr839-ps1A0A1D5RMH6 312 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Fam166bA2AIP0 273 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 CrnnD3YUU6 520 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Vmn2r72D3Z4N8 856 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Tada2bD3Z4Z0 420 aaKnown RBP4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gm9268E9Q0M3 861 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Rgs2O08849 211 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Fgf10O35565 209 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Mmp15O54732 657 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 NlkO54949 527 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Slc25a17O70579 307 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Hoxd4P10628 250 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Bmp6P20722 510 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Celf1P28659 486 aaKnown RBP4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Dlx2P40764 332 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 GlaP51569 419 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 PolgP54099 1218 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Casp4P70343 373 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Polr1bP70700 1135 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 G3bp2P97379 482 aaKnown RBP4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 PkibQ04758 92 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 PepdQ11136 493 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Calr4Q3TQS0 420 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Ccndbp1Q3TVC7 356 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Q3U6N9 222 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Brf2Q3UAW9 420 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Dtx3lQ3UIR3 748 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Ankrd13cQ3UX43 541 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Fam71f1Q3UZD7 341 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Gas6Q61592 674 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Rad17Q6NXW6 688 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Phf8Q80TJ7 1023 aa4.35□□□□□ -1.71
Hmgb1-ps2-201ENSMUST00000117548 Mettl20Q80ZM3 255 aa4.35□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms