RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Cdh5P55284 784 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gabrb3P63080 473 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Fam129aQ3UW53 926 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Sarm1Q6PDS3 724 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 PoliQ6R3M4 717 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tas2r115Q7M719 310 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 C6.1alQ7M757 291 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 GnsQ8BFR4 544 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Nipal1Q8BMW7 416 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tmprss4Q8VCA5 435 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Stard13Q923Q2 1113 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tcf7l2Q924A0 459 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Snx29Q9D3S3 818 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cd320Q9Z1P5 260 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Myo16Q5DU14 1919 aa13.09□□□□□ -0.31
Nup88-203ENSMUST00000108531 Klhl32A2AJX0 620 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Adamts14E9PX39 1209 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 4930426L09RikE9Q0N7 123 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 JhyE9Q793 770 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Dnmt3bO88509 859 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mthfd2P18155 350 aaKnown RBP13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tap2P36371 702 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mxd1P50538 227 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 CcnfP51944 777 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Itga11P61622 1188 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pcsk1P63239 753 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ptcd3Q14C51 685 aaKnown RBP13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Micall2Q3TN34 1009 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Olfr464Q5SW48 313 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ssx9Q6XAS3 170 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tigd3Q7TM95 470 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Dyrk4Q8BI55 632 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Nup93Q8BJ71 819 aaKnown RBP13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cep57Q8CEE0 500 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tspan14Q8QZY6 270 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pcdhac2Q91Y09 1006 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 DdoQ922Z0 341 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Efcab9Q9DAM2 216 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ddx59Q9DBN9 619 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cyp4v2Q9DBW0 525 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Dpp7Q9ET22 506 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ap4s1Q9WVL1 144 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 S1pr4Q9Z0L1 386 aa13.08□□□□□ -0.31
Nup88-203ENSMUST00000108531 Plxna1P70206 1894 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm4756A0A140LIS8 335 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Klhl33G3UW92 533 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm3336J3QMQ6 198 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mfsd4b4J3QNS5 503 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 CrymO54983 313 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Chrna4O70174 629 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 CfhP06909 1234 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Htr2cP34968 459 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Dpf3P58269 378 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rab10P61027 200 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ctps2P70303 586 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 PgrQ00175 926 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 TchpQ3TVW5 497 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mrgprb1Q3UG61 350 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Armcx5Q3UZB0 606 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mfsd3Q5U419 412 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cntn4Q69Z26 1026 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ggnbp1Q6K1E7 370 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Lrrc24Q8BHA1 521 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pnma2Q8BHK0 365 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Slc46a2Q8CA03 479 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Fam160b1Q8CDM8 764 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tdrd7Q8K1H1 1086 aaKnown RBP13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pcdhb17Q91VD8 799 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tmco4Q91WU4 631 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 MrgpreQ91ZB7 310 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Trim8Q99PJ2 551 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pih1d1Q9CQJ2 290 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ifrd2Q9D8U0 441 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Asap1Q9QWY8 1147 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tle2Q9WVB2 767 aa13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Myo18aQ9JMH9 2050 aaKnown RBP13.08□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm43518A0A0G2JGB6 165 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Wdr49A0A0N4SUK7 710 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Dennd5bA2RSQ0 1274 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Plk2P53351 682 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Serpina5P70458 405 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gdf3Q07104 366 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pcid2Q8BFV2 399 aaKnown RBP13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Q8CCC3 530 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Nkiras1Q8CEC5 192 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gfm2Q8R2Q4 779 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zfp655Q9CZP3 541 aaKnown RBP13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Upk1aQ9D132 257 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Q9D979 236 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Stx12Q9ER00 274 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Vmn2r74E9PW21 853 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Vmn2r19G5E8G4 854 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 2610028H24RikG5E8K1 270 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 ZfrO88532 1074 aaKnown RBP13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Jak1P52332 1153 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Adgre1Q61549 931 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sema3cQ62181 751 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gstt1Q64471 240 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tbc1d12Q6A039 696 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Podnl1Q6P3Y9 559 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms