RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Fbxw7Q8VBV4 629 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 GldcQ91W43 1025 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Reep3Q99KK1 254 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mtfr1Q99MB2 328 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mrps18aQ99N85 196 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmem114Q9D563 222 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trim54Q9ERP3 366 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pex11bQ9Z210 259 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm28168A0A087WNP1 180 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gucy2dA0A0U1RPR8 1117 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zbed5B2RPU8 756 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cldn24D3YXJ9 220 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp963D3Z2T8 383 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Erich2E9Q1A6 463 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zbtb10E9Q8X5 861 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ephx2P34914 554 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Adcyap1r1P70205 496 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Aarsd1Q3THG9 412 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gpr174Q3U507 335 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fam35aQ3UEN2 891 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ssx9Q6XAS3 170 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dnajc16Q80TN4 772 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 LipmQ8K2A6 422 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gmpr2Q99L27 348 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sike1Q9CPR7 207 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trpc4Q9QUQ5 974 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fbxo16Q9QZM9 334 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Bmp15Q9Z0L4 392 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Akap5D3YVF0 745 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vmn2r11E9Q4X4 861 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trdmt1O55055 415 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 MutP16332 748 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Abcg2Q7TMS5 657 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 RtknQ8C6B2 564 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fam160b1Q8CDM8 764 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Syne4Q8CII8 388 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nsl1Q8K305 281 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Oit3Q8R4V5 546 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr1325Q8VF43 315 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pth2rQ91V95 546 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cyp3a41aQ9JMA7 504 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Asap1Q9QWY8 1147 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cdh22Q9WTP5 813 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trpc7Q9WVC5 862 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Arid3bQ9Z1N7 568 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp236S4R299 1847 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mtx3D3YTP3 312 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp384E9Q1A5 584 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Klhl33G3UW92 533 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 NmbrO54799 390 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 TnfP06804 235 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 TxnP10639 105 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 FlgP11088 336 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 TankP70347 448 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gabpb1Q00420 383 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cacna1cQ01815 2139 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Xkr4Q5GH67 647 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Adgre1Q61549 931 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dennd2cQ6P9P8 914 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rpl10Q6ZWV3 214 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Alkbh8Q80Y20 664 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gxylt2Q810K9 444 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ireb2Q811J3 963 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Entpd3Q8BFW6 529 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cdkn2aipQ8BI72 563 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nup93Q8BJ71 819 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmtc3Q8BRH0 920 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Celf3Q8CIN6 465 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sgpl1Q8R0X7 568 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Acsf2Q8VCW8 615 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Polr3eQ9CZT4 710 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fam162aQ9D6U8 155 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 RhojQ9ER71 214 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Usp34Q6ZQ93 3582 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Adgra2Q91ZV8 1336 aa9.92□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gbp6A0A0G2JDV3 611 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pdia2D3Z6P0 527 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pcsk6F6XJP7 959 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mthfd2P18155 350 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Htr2cP34968 459 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Usp46P62069 366 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ext2P70428 718 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Eps8Q08509 821 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Micall2Q3TN34 1009 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ankrd34bQ3UUF8 508 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sema3cQ62181 751 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fastkd1Q6DI86 829 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Jade1Q6ZPI0 834 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Smpd4Q6ZPR5 823 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ints7Q7TQK1 966 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmem121Q80XA0 318 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Stx16Q8BVI5 326 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Asb14Q8C6Y6 587 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 HscbQ8K3A0 234 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ero1bQ8R2E9 467 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr30Q8VGD8 315 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Serpina3nQ91WP6 418 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 NamptQ99KQ4 491 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Slamf8Q9D3G2 278 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tnfaip8l2Q9D8Y7 184 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms