RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Ubtfl1Q3USZ2 394 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Slc20a1Q61609 681 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Elac2Q80Y81 831 aaKnown RBP18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Iars2Q8BIJ6 1012 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Gsg1Q8R1W2 324 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Vmn1r79Q8R285 306 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Ddx1Q91VR5 740 aaKnown RBP18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Hdac11Q91WA3 347 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Smim11aQ99J19 55 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Tdp2Q9JJX7 370 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Stap1Q9JM90 297 aaKnown RBP18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Dnajc12Q9R022 198 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Scn3aA2ASI5 1947 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Olfr1160A2AVT0 319 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Gm17175E9Q528 179 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Gm2163Q6PCY5 473 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Lrrc8dQ8BGR2 859 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Stk32cQ8QZV4 488 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Upb1Q8VC97 393 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Zfp646Q6NV66 1788 aa18.9■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Ism2D3Z6A3 493 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 S100a9P31725 113 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Gxylt1Q3UHH8 404 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Gprin1Q3UNH4 932 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Olfm4Q3UZZ4 505 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Defa17Q64016 82 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Nlrp9cQ66X01 1004 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Scd4Q6T707 353 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Letm2Q7TNU7 480 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Olfr295Q7TS08 309 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Gabbr2Q80T41 940 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Cxcr1Q810W6 351 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Fbxo44Q8BK26 255 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Atxn7l2Q8C8K6 696 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Retreg1dQ8VE91 480 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Pcdhb2Q91Y00 799 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Unc45aQ99KD5 944 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Fbxl20Q9CZV8 436 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 NplQ9DCJ9 320 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Htr3bQ9JHJ5 437 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Dctn3Q9Z0Y1 186 aa18.89■□□□□ 0.62
Ubp1-201ENSMUST00000009885 Bclaf3A2AG58 752 aaKnown RBP18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Mkrn2osD3Z393 217 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Gm6408J3QNG1 320 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Itgb3O54890 787 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Sh3pxd2aO89032 1124 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 SagP20443 403 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Prdx5P99029 210 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 ItkQ03526 625 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 FAM120AQ6A0A9 1112 aaKnown RBP18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Armc12Q80X86 340 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 MtbpQ8BJS8 894 aaKnown RBP18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Camk1dQ8BW96 385 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Bri3bpQ8BXV2 253 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Scara3Q8C850 606 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 LzicQ8K3C3 190 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Slc22a7Q91WU2 540 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Prmt3Q922H1 532 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Mindy4b-psA0A1W2P7H6 457 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Mybpc1D3YU50 1127 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Gm5930D3Z257 264 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 FgaE9PV24 789 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 SiaeP70665 541 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Kcnq1P97414 668 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 SirpaP97797 513 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Zc3h15Q3TIV5 426 aaKnown RBP18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Trafd1Q3UDK1 580 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Slc22a16Q497L8 649 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Cyp2r1Q6VVW9 501 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Q8BZE1 841 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 LnpepQ8C129 1025 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Tada2aQ8CHV6 443 aa18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 QkiQ9QYS9 341 aaKnown RBP18.89■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Vmn2r100E9QAZ9 850 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 MafgO54790 162 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 AurkaP97477 395 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Abcd2Q61285 741 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 XpaQ64267 272 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Samd4bQ80XS6 687 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Nmur2Q8BZ39 395 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Itfg1Q99KW9 610 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Aldh1a3Q9JHW9 512 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Cd320Q9Z1P5 260 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Olfr625-ps1A0A140T8L4 321 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Vmn2r-ps130A0A140T8U3 855 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Lrig1P70193 1091 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Mef2aQ60929 498 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Sox17Q61473 419 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Aldh1a2Q62148 518 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Stk40Q7TNL3 435 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Snx32Q80ZJ7 404 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Mrps35Q8BJZ4 320 aaKnown RBP18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Pgm5Q8BZF8 567 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Gramd1aQ8VEF1 722 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Olfr617Q8VGA1 318 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Cdhr5Q8VHF2 831 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 H2afyQ9QZQ8 372 aaKnown RBP18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Olfr671A0A1B0GSN5 317 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 Ptpn3A2ALK8 913 aa18.88■□□□□ 0.61
Ubp1-201ENSMUST00000009885 TriqkB2B9E1 86 aa18.88■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms