RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Vta1Q9CR26 309 aa12.23□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Sesn3Q9CYP7 492 aa12.23□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Pinx1Q9CZX5 332 aaKnown RBP12.23□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Tmem8aQ9ESN3 769 aa12.23□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Homer2Q9QWW1 354 aa12.23□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Tnfsf13bQ9WU72 309 aa12.23□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Tbc1d25A1A5B6 742 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Klhl4B1AZR0 717 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Abcb5B5X0E4 1255 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Tatdn2B7ZNL9 783 aaKnown RBP12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 9330159F19RikD3Z623 648 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Inpp5aE9QAS7 422 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 AlpiF8VPQ6 554 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ptpn9O35239 593 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Fmo3P97501 534 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 HexdcQ3U4H6 486 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 SynaQ5G5D5 617 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ddr2Q62371 854 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Slc39a14Q75N73 489 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Mis18bp1Q80WQ8 998 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 AA792892Q8C6S1 278 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Slc45a3Q8K0H7 553 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Adam32Q8K410 754 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ccdc59Q8R2N0 240 aaKnown RBP12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Nup85Q8R480 656 aaKnown RBP12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Olfr390Q8VEZ7 311 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Xpo5Q924C1 1204 aaKnown RBP12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Lrrc18Q9CQ07 262 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Hormad1Q9D5T7 392 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ngly1Q9JI78 651 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Syt5Q9R0N5 386 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Arid2E9Q7E2 1828 aa12.22□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Pcdh7A0A0A6YY83 1255 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Gm14401A2ARV7 303 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Vmn2r46L7N282 809 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 AldoaP05064 364 aaKnown RBP12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Lamp1P11438 406 aaKnown RBP12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ly6dP35459 127 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Rpl36P47964 105 aaKnown RBP12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Tubgcp3P58854 905 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 SelpQ01102 768 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Col9a2Q07643 688 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Tmem26Q3UP23 366 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Snx21Q3UR97 363 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Scn2bQ56A07 215 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Heatr9Q5QNV8 569 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Znf148Q61624 794 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 MogQ61885 246 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Rbl1Q64701 1063 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 CapslQ6P8Y1 208 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Btnl1Q7TST0 509 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Trit1Q80UN9 467 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Znf618Q80YY7 953 aaKnown RBP12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Krr1Q8BGA5 380 aaKnown RBP12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Slc45a1Q8BIV7 751 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Camk1dQ8BW96 385 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Slco6c1Q8C0X7 706 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Kctd15Q8K0E1 283 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ppp6r2Q8R3Q2 923 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Rem2Q8VEL9 341 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 HlcsQ920N2 722 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Dach2Q925Q8 634 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Unc45aQ99KD5 944 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Mccc1Q99MR8 717 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Lrrc4Q99PH1 652 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 MydgfQ9CPT4 166 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ankrd61Q9CQM6 421 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Elp3Q9CZX0 547 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 9030624G23RikQ9D308 155 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Cdyl2Q9D5D8 503 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Atp13a1Q9EPE9 1200 aaKnown RBP12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Il20Q9JKV9 176 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Ap4b1Q9WV76 738 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Gria4Q9Z2W8 902 aa12.21□□□□□ -0.45
Ufd1-201ENSMUST00000005394 Gm4869A0A1B0GSG7 984 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Rnf19bA2A7Q9 732 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Gm13040A2A8C4 496 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Rap1gapA2ALS5 663 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Gm13101A2ASJ0 481 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Skint3A7TZF0 458 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Gm13119B1ARV5 481 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Serpina3iD3Z450 408 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 DgkdE9PUQ8 1220 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 B020004C17RikJ3QP07 232 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Serpinb9O08797 374 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Emp3O35912 163 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 JunbP09450 344 aaKnown RBP12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Lta4hP24527 611 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Wnt3aP27467 352 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Ephx2P34914 554 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Psma2P49722 234 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 CiitaP79621 1155 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 RnaselQ05921 735 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Inf2Q0GNC1 1273 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Fam83hQ148V8 1209 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Gm5431Q5NCB3 844 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 StyxQ60969 223 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Txndc8Q69AB2 127 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Gm5414Q6IFZ8 552 aa12.21□□□□□ -0.46
Ufd1-201ENSMUST00000005394 Zdhhc17Q80TN5 632 aa12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms