RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Rtp1Q8C8C1 263 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cpxm2Q9D2L5 764 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Igdcc4Q9EQS9 1252 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Prl2a1Q9JHK0 228 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn2r59E9PUT5 865 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Apol11bE9PUZ0 337 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Slc4a5E9Q3M5 1116 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mc4rP56450 332 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam83hQ148V8 1209 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 RasefQ5RI75 627 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Kcna4Q61423 654 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Slc9a4Q8BUE1 797 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tada2aQ8CHV6 443 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ipo11Q8K2V6 975 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Myoz3Q8R4E4 245 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pcdhga10Q91XY9 930 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 TmlheQ91ZE0 421 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Snrpb2Q9CQI7 225 aaKnown RBP12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam122aQ9DB52 284 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Abcb9Q9JJ59 762 aa12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Top3bQ9Z321 862 aaKnown RBP12.91□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Skint3A7TZF0 458 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 JhyE9Q793 770 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 MycP01108 439 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fgfr2P21803 821 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tarbp2P97473 365 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Afg1lQ3V384 480 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Wdr18Q4VBE8 431 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Osbp2Q5QNQ6 908 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Sdf4Q61112 361 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 SowahaQ8BLS7 548 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Atp6v1g3Q8BMC1 118 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 SowahcQ8C0J6 512 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gramd1aQ8VEF1 722 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Olfr1361Q8VFH0 317 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Itfg1Q99KW9 610 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pex6Q99LC9 981 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Lzts3A2AHG0 700 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pnldc1B2RXZ1 531 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm3248K7N721 186 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fgfr1P16092 822 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ly9Q01965 654 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dmc1Q61880 340 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ddr2Q62371 854 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ssx9Q6XAS3 170 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vgll2Q8BGW8 322 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Kansl2Q8BQR4 486 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Palm2Q8BR92 376 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Aqp12Q8CHJ2 290 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam151aQ8QZW3 608 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cox18Q8VC74 331 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Depdc7Q91WS7 511 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tmco1Q921L3 188 aaKnown RBP12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Decr1Q9CQ62 335 aaKnown RBP12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 CpqQ9WVJ3 470 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Apoa4P06728 395 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Epb41P48193 858 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 PrkacbP68181 351 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 GapdhsQ64467 440 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Far2Q7TNT2 515 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zbtb5Q7TQG0 670 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Teddm1aQ810U2 305 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Hsdl1Q8BTX9 330 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ssh3Q8K330 649 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Elp3Q9CZX0 547 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ddit4Q9D3F7 229 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Spata1Q9D5R4 444 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Plin3Q9DBG5 437 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 CtsmQ9JL96 333 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Trpc4apQ9JLV2 797 aa12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 H2afyQ9QZQ8 372 aaKnown RBP12.9□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cyp2b13A6H6J2 491 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Vmn2r70K7N702 854 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Hk2O08528 917 aaKnown RBP12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ctbp1O88712 441 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Phka1P18826 1241 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fdft1P53798 416 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pfdn4Q3UWL8 134 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Nutm2Q3V0C3 733 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Usp7Q6A4J8 1103 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Slc39a14Q75N73 489 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Sgo2Q7TSY8 1164 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Trnau1apQ80VC6 287 aaKnown RBP12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Scara3Q8C850 606 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Castor2Q8CAB8 329 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 CarfQ8VHI4 689 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Asb7Q91ZU0 318 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Anxa13Q99JG3 317 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Nck1Q99M51 377 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Syvn1Q9DBY1 612 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 PalmdQ9JHU2 551 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Olfr1145A2AVC7 325 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ptchd4B9EKX1 904 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 MndalD0QMC3 538 aaKnown RBP12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gm44G3UW88 330 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Kifc3O35231 824 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 CcnoP0C242 352 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 MafP54843 370 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gm4951Q3UED7 406 aa12.89□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fam129aQ3UW53 926 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms