RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CELF6Q96J87 481 aaKnown RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 GPR22Q99680 433 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 OMDQ99983 421 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF385DQ9H6B1 395 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 VTA1Q9NP79 307 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF232Q9UNY5 417 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 CSE1LP55060 971 aaKnown RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 NSUN2Q08J23 767 aaKnown RBP eCLIP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 CYLC2Q14093 348 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 FRG1Q14331 258 aaKnown RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 USP10Q14694 798 aaKnown RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 EML3Q32P44 896 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 MFSD6LQ8IWD5 586 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 CNTD1Q8N815 330 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 NLGN2Q8NFZ4 835 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 RP9Q8TA86 221 aaKnown RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 KCTD13Q8WZ19 329 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF560Q96MR9 790 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 HAPLN3Q96S86 360 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 COPS7BQ9H9Q2 264 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 CLIC5Q9NZA1 410 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 NRCAMQ92823 1304 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 TARM1B6A8C7 271 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 DLX3O60479 287 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 USP17L7P0C7H9 530 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 NCAM1P13591 858 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ENO3P13929 434 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ARSAP15289 507 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 GJA5P36382 358 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 FLOT2Q14254 428 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 PDCD2Q16342 344 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ANO4Q32M45 955 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 UBXN11Q5T124 520 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 NXNQ6DKJ4 435 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 SLC41A1Q8IVJ1 513 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 DENND6AQ8IWF6 608 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 FAM156AQ8NDB6 213 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 SPATA22Q8NHS9 363 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 USP33Q8TEY7 942 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 NAT14Q8WUY8 206 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 SCYL1Q96KG9 808 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 TSPAN18Q96SJ8 248 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 MED10Q9BTT4 135 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 FTHL17Q9BXU8 183 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 FBXW11Q9UKB1 542 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 TLK1Q9UKI8 766 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 PRPF19Q9UMS4 504 aaKnown RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 WARSP23381 471 aaKnown RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 PMLP29590 882 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 NPY2RP49146 381 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 PPIL2Q13356 520 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 CTBP1Q13363 440 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 BNC2Q6ZN30 1099 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 SDCCAG8Q86SQ7 713 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 CEP97Q8IW35 865 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 CPSF7Q8N684 471 aaKnown RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 EDEM1Q92611 657 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 DPF3Q92784 378 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 TEKT5Q96M29 485 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 IL22Q9GZX6 179 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 CRTAC1Q9NQ79 661 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 DDIT4Q9NX09 232 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 C6orf203Q9P0P8 240 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 RIMS3Q9UJD0 308 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 MRPL42Q9Y6G3 142 aaKnown RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 MYOCOSA0A1B0GUC4 107 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 MAGEB16A2A368 324 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 DENRO43583 198 aaKnown RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 AP1G1O43747 822 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 CABYRO75952 493 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 TFAP2AP05549 437 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■□□□□ 9.8
PHGDH-233ENST00000642021 PPARGP37231 505 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 DAOAP59103 153 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 MPP1Q00013 466 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 TSTD2Q5T7W7 516 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 FAM219BQ5XKK7 198 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 C16orf89Q6UX73 402 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 ARHGAP36Q6ZRI8 547 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 MARVELD2Q8N4S9 558 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 ZMIZ2Q8NF64 920 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 BHLHE22Q8NFJ8 381 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 STYXQ8WUJ0 223 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 DNAJB3Q8WWF6 145 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 SREK1Q8WXA9 508 aaKnown RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 NTAN1Q96AB6 310 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 HDAC11Q96DB2 347 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF419Q96HQ0 510 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-233ENST00000642021 SLC9A7Q96T83 725 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 SMOQ99835 787 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 OCEL1Q9H607 264 aa14.04□□□□□ -0.16
PHGDH-233ENST00000642021 MT-CYBP00156 380 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 PGK1P00558 417 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 KCNE1P15382 129 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 TCN1P20061 433 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 PNPLA4P41247 253 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 CCNA1P78396 465 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 GALNT2Q10471 571 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 SCAPQ12770 1279 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms