RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 UBA2Q9UBT2 640 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 SOX13Q9UN79 622 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 CPQQ9Y646 472 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 ZFP37Q9Y6Q3 630 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 HEATR9A2RTY3 570 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 C2orf78A6NCI8 922 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 H3BNC9 293 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SLC9A3R1O14745 358 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 PAPSS2O95340 614 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 PAPLNO95428 1278 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 PEX11BO96011 259 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 MT-ND3P03897 115 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 HLA-DQB2P05538 268 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SERPINF2P08697 491 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 ADRA1DP25100 572 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 MGAT1P26572 445 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 WEE1P30291 646 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SLC6A4P31645 630 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 LSP1P33241 339 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 AVPR1AP37288 418 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 MAPK8P45983 427 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 POLD2P49005 469 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 ATP1A2P50993 1020 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 IRAK1P51617 712 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SESN2P58004 480 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 ERVFC1P60507 584 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 IL9RQ01113 521 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SLC20A2Q08357 652 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CRYMQ14894 314 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 RAB30Q15771 203 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SEPT7Q16181 437 aaKnown RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 UGP2Q16851 508 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 KBTBD12Q3ZCT8 623 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 INO80DQ53TQ3 878 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 PDPK2PQ6A1A2 396 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 IL31Q6EBC2 164 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 TIFABQ6ZNK6 161 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 GAREM2Q75VX8 874 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SPATS2Q86XZ4 545 aaKnown RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 TP53INP2Q8IXH6 220 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 LMNTD2Q8IXW0 634 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CCDC33Q8N5R6 958 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 ARL14EPQ8N8R7 260 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 OR52K1Q8NGK4 314 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CALML6Q8TD86 181 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 DCAKDQ8WVC6 231 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 DYDC1Q8WWB3 177 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 SCG3Q8WXD2 468 aaKnown RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 ARNTL2Q8WYA1 636 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 ACDQ96AP0 544 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CERS2Q96G23 380 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CABS1Q96KC9 395 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 PSKH2Q96QS6 385 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CPNE1Q99829 537 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 MGME1Q9BQP7 344 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 MLPHQ9BV36 600 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 KIFC1Q9BW19 673 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 CINPQ9BW66 212 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 ACE2Q9BYF1 805 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-215ENST00000641371 RNF38Q9H0F5 515 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 EPN3Q9H201 632 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 TRABDQ9H4I3 376 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 PDFQ9HBH1 243 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 NT5MQ9NPB1 228 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 MAN1C1Q9NR34 630 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 NDFIP2Q9NV92 336 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 MKS1Q9NXB0 559 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 PRKAG3Q9UGI9 489 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 RIMKLBQ9ULI2 386 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 RPS6KL1Q9Y6S9 549 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 FAM169AQ9Y6X4 670 aa9.88□□□□□ -0.83
PHGDH-215ENST00000641371 TMEM120BA0PK00 339 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 H0Y626 953 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 GFRA2O00451 464 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 AVILO75366 819 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 BANF1O75531 89 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 KLKB1P03952 638 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 FGF1P05230 155 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 IRF1P10914 325 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ALADP13716 330 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 CHN1P15882 459 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 GCAP28676 217 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ADRA1AP35348 466 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 GP5P40197 560 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 GYS2P54840 703 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 CSE1LP55060 971 aaKnown RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 WNT3AP56704 352 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ITKQ08881 620 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 NSUN2Q08J23 767 aaKnown RBP eCLIP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 CDH18Q13634 790 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 SPARCL1Q14515 664 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 DBN1Q16643 649 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 SKIDA1Q1XH10 827 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ANKRD20A4Q4UJ75 823 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 HP1BP3Q5SSJ5 553 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 GRTP1Q5TC63 336 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 RETSATQ6NUM9 610 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 PKN3Q6P5Z2 889 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms