RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MCM8Q9UJA3 840 aa17.33■□□□□ 0.37
PHGDH-211ENST00000641213 SLC39A10Q9ULF5 831 aa17.33■□□□□ 0.37
PHGDH-211ENST00000641213 C15orf41Q9Y2V0 281 aa17.33■□□□□ 0.37
PHGDH-211ENST00000641213 PCDHB5Q9Y5E4 795 aa17.33■□□□□ 0.37
PHGDH-211ENST00000641213 MOXD2PA6NHM9 499 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 SLC2A3P11169 496 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 CPA2P48052 419 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 TBX4P57082 545 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 ANO4Q32M45 955 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 MAVSQ7Z434 540 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 TTC9BQ8N6N2 239 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 SH3TC2Q8TF17 1288 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 MCUR1Q96AQ8 359 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 HHIPL1Q96JK4 782 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 PPP1R2P1Q96PQ5 205 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 NUDCD1Q96RS6 583 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 RHOJQ9H4E5 214 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 ENTPD7Q9NQZ7 604 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 SRRDQ9UH36 339 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 TAGLN3Q9UI15 199 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 IPO11Q9UI26 975 aaKnown RBP17.33■□□□□ 0.36
PHGDH-211ENST00000641213 BPTFQ12830 3046 aa17.33■□□□□ 0.36
PHGDH-211ENST00000641213 B2RBV5 119 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 SYN3O14994 580 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 PMPCBO75439 489 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 GABRB3P28472 473 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 MAGEA11P43364 429 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 TBCCQ15814 346 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 CTXN3Q4LDR2 81 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 POTEHQ6S545 545 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ARHGAP18Q8N392 663 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 PPHLN1Q8NEY8 458 aaKnown RBP17.32■□□□□ 0.36
PHGDH-211ENST00000641213 GPR152Q8TDT2 470 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 MRGPRX2Q96LB1 330 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 NMRAL1Q9HBL8 299 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 IL37Q9NZH6 218 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 FNIP2Q9P278 1114 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 PRR5-ARHGAP8B1AHC4 643 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ZNF195O14628 629 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 DIAPH2O60879 1101 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 VAPBO95292 243 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 AHSGP02765 367 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ALOX15P16050 662 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ARCN1P48444 511 aaKnown RBP17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ARHGAP8P85298 464 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 UBAP2LQ14157 1087 aaKnown RBP17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ESRP1Q6NXG1 681 aaKnown RBP17.32■□□□□ 0.36
PHGDH-211ENST00000641213 RANBP10Q6VN20 620 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 NAPRTQ6XQN6 538 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 CNTN4Q8IWV2 1026 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 UMODL1-AS1Q8N2C9 162 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ENDOVQ8N8Q3 282 aaKnown RBP17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ATAD1Q8NBU5 361 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 FBXO27Q8NI29 283 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 C1QTNF1Q9BXJ1 281 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 FSD1LQ9BXM9 530 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 PRDM5Q9NQX1 630 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-211ENST00000641213 DNAJC28Q9NX36 388 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 SORCS3Q9UPU3 1222 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 ANKRD6Q9Y2G4 727 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 TCAF1Q9Y4C2 921 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 PCDHB12Q9Y5F1 795 aa17.32■□□□□ 0.36
PHGDH-211ENST00000641213 NEBLO76041 1014 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 PEX11BO96011 259 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 ARNTP27540 789 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 EFEMP1Q12805 493 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 RCN2Q14257 317 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 RABGAP1LQ5R372 815 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 RAPH1Q70E73 1250 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 KDELC2Q7Z4H8 507 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 TMPRSS6Q8IU80 811 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 SLC43A3Q8NBI5 491 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 NSMCE1Q8WV22 266 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 PTCD2Q8WV60 388 aaKnown RBP17.31■□□□□ 0.36
PHGDH-211ENST00000641213 MMADHCQ9H3L0 296 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-211ENST00000641213 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 FAM96AQ9H5X1 160 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 MRM3Q9HC36 420 aaKnown RBP17.31■□□□□ 0.36
PHGDH-211ENST00000641213 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 SLC2A6Q9UGQ3 507 aa17.31■□□□□ 0.36
PHGDH-211ENST00000641213 APOBEC2Q9Y235 224 aaKnown RBP17.31■□□□□ 0.36
PHGDH-211ENST00000641213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 A0A1W2PQ45 241 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 A0A1W2PQY0 241 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 AOC2O75106 756 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TPBGLP0DKB5 382 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 GNAZP19086 355 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 IDH3AP50213 366 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 NDST2P52849 883 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 PGGT1BP53609 377 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 KDSRQ06136 332 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 CTBP1Q13363 440 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 MRPL58Q14197 206 aaKnown RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 USP10Q14694 798 aaKnown RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 FAM171A1Q5VUB5 890 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TFAP2DQ7Z6R9 452 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 DENND6AQ8IWF6 608 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms