RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 ASTE1Q2TB18 679 aaPredicted RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 C9orf64Q5T6V5 341 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 TBC1D3GQ6DHY5 549 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 TBC1D3CQ6IPX1 549 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 RAD9BQ6WBX8 426 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 NOP9Q86U38 636 aaKnown RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 PRPF39Q86UA1 669 aaKnown RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 TBC1D3Q8IZP1 549 aaPredicted RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 TTC39CQ8N584 583 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 SLC4A11Q8NBS3 891 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 CCDC112Q8NEF3 446 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 SLC20A1Q8WUM9 679 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 TFAP2BQ92481 460 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 PLD4Q96BZ4 506 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 SGF29Q96ES7 293 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 TMA16Q96EY4 203 aaKnown RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 PSMG3-AS1Q96PY0 264 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 ZSWIM1Q9BR11 485 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 SYT11Q9BT88 431 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 NT5C1AQ9BXI3 368 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 WDR70Q9NW82 654 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 NOCTQ9UK39 431 aaKnown RBP11.86□□□□□ -0.51
MECP2-226ENST00000640414 STRIP2Q9ULQ0 834 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 CA5BQ9Y2D0 317 aa11.86□□□□□ -0.51
MECP2-226ENST00000640414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
MECP2-226ENST00000640414 SPTAN1Q13813 2472 aaKnown RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 NYNRINQ9P2P1 1898 aaKnown RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 TLN1Q9Y490 2541 aaKnown RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 BSNQ9UPA5 3926 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 SSU72P8A0A1W2PR75 194 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 ENO4A6NNW6 628 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 TNFSF15O95150 251 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 GJB6O95452 261 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 PAEPP09466 180 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 SFTPCP11686 197 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 MAT2AP31153 395 aaKnown RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 INHBCP55103 352 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 ST8SIA6P61647 398 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 SRSF6Q13247 344 aaKnown RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 STAT4Q14765 748 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 TRIP4Q15650 581 aaPredicted RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 TAF3Q5VWG9 929 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 UNC93AQ86WB7 457 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 ARL14Q8N4G2 192 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 IFI44Q8TCB0 444 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 EPS8L1Q8TE68 723 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 ZNF606Q8WXB4 792 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 GRAMD1AQ96CP6 724 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 CYFIP2Q96F07 1278 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 MRGPRX3Q96LB0 322 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 CCDC42Q96M95 316 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 HEXIM2Q96MH2 286 aaKnown RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 PCDHB18PQ96TA0 734 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 FAM129BQ96TA1 746 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 CYTH4Q9UIA0 394 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 STOML2Q9UJZ1 356 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 DMTF1Q9Y222 760 aa11.85□□□□□ -0.51
MECP2-226ENST00000640414 EPN1Q9Y6I3 576 aaPredicted RBP11.85□□□□□ -0.51
MECP2-226ENST00000640414 DDX3XO00571 662 aaKnown RBP eCLIP11.84□□□□□ -0.51
MECP2-226ENST00000640414 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 PIAS2O75928 621 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 THEGLP0DJG4 465 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 TNFAIP3P21580 790 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 C5AR1P21730 350 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 GNA15P30679 374 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 HARS2P49590 506 aaKnown RBP11.84□□□□□ -0.51
MECP2-226ENST00000640414 CDR2Q01850 454 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 POM121L1PQ3SYA9 428 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 TDRD12Q587J7 1177 aaKnown RBP11.84□□□□□ -0.51
MECP2-226ENST00000640414 HIST2H2BCQ6DN03 193 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.84□□□□□ -0.51
MECP2-226ENST00000640414 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
MECP2-226ENST00000640414 CCDC170Q8IYT3 715 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 WDR36Q8NI36 951 aaKnown RBP11.84□□□□□ -0.51
MECP2-226ENST00000640414 SLC30A5Q8TAD4 765 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 TTC17Q96AE7 1141 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 ARRDC3Q96B67 414 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 TRIM44Q96DX7 344 aaPredicted RBP11.84□□□□□ -0.51
MECP2-226ENST00000640414 KLHDC7BQ96G42 594 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 LMLNQ96KR4 655 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 USP29Q9HBJ7 922 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 KLHL11Q9NVR0 708 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 NLGN3Q9NZ94 848 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 KIAA1257Q9ULG3 409 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 PYCARDQ9ULZ3 195 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 RELNP78509 3460 aa11.84□□□□□ -0.51
MECP2-226ENST00000640414 USP9YO00507 2555 aaPredicted RBP11.83□□□□□ -0.52
MECP2-226ENST00000640414 KIF26BQ2KJY2 2108 aa11.83□□□□□ -0.52
MECP2-226ENST00000640414 A0A087X0T9 212 aa11.83□□□□□ -0.52
MECP2-226ENST00000640414 TARSL2A2RTX5 802 aaKnown RBP11.83□□□□□ -0.52
MECP2-226ENST00000640414 TTC34A8MYJ7 566 aa11.83□□□□□ -0.52
MECP2-226ENST00000640414 THAP12O43422 761 aa11.83□□□□□ -0.52
MECP2-226ENST00000640414 AKR1B10O60218 316 aa11.83□□□□□ -0.52
MECP2-226ENST00000640414 NOBOXO60393 691 aa11.83□□□□□ -0.52
MECP2-226ENST00000640414 RTN2O75298 545 aa11.83□□□□□ -0.52
MECP2-226ENST00000640414 ADH1BP00325 375 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms