RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ABLIM2Q6H8Q1 611 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 RNF111Q6ZNA4 994 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 LINC00696Q6ZRV3 163 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 GRAMD1AQ96CP6 724 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 ZDHHC12Q96GR4 267 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 GSDMAQ96QA5 445 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 PKP4Q99569 1192 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 BCO1Q9HAY6 547 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 EHD2Q9NZN4 543 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 KCMF1Q9P0J7 381 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 APPL1Q9UKG1 709 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 KIF3AQ9Y496 699 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 ATP8B3O60423 1300 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 PTPRFP10586 1907 aa7.62□□□□□ -1.19
NECAP1-220ENST00000639841 ZSWIM8A7E2V4 1837 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 CEP290O15078 2479 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 PRAMEF4O60810 478 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 CUTAO60888 179 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 PTGS1P23219 599 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 KELP23276 732 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 TMOD1P28289 359 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 CCR10P46092 362 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 IFNAR2P48551 515 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 CDH15P55291 814 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 CAP1Q01518 475 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 SF3A3Q12874 501 aaKnown RBP eCLIP7.61□□□□□ -1.19
NECAP1-220ENST00000639841 GAS6Q14393 721 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 HLA-DQA1Q5Y7H0 255 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 DRICH1Q6PGQ1 229 aaPredicted RBP7.61□□□□□ -1.19
NECAP1-220ENST00000639841 TDHQ8IZJ6 230 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 OR7D4Q8NG98 312 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 TRIM7Q9C029 511 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 MROH8Q9H579 483 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 C11orf49Q9H6J7 331 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 UNKLQ9H9P5 680 aaKnown RBP7.61□□□□□ -1.19
NECAP1-220ENST00000639841 IL1RAPL2Q9NP60 686 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 C1GALT1Q9NS00 363 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 TUBE1Q9UJT0 475 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 ANAPC2Q9UJX6 822 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 PCDHB4Q9Y5E5 795 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 ACTL7AQ9Y615 435 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 GAKO14976 1311 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 AOX1Q06278 1338 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 ATRNL1Q5VV63 1379 aa7.61□□□□□ -1.19
NECAP1-220ENST00000639841 LDLRAD4O15165 306 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CER1O95813 267 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 GNAI2P04899 355 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MPOP05164 745 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 LTA4HP09960 611 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 FAHP16930 419 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 ADRA1BP35368 520 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MSX2P35548 267 aaPredicted RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CASP3P42574 277 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MATR3P43243 847 aaKnown RBP eCLIP7.6□□□□□ -1.196e-7■■■■□ 26.2
NECAP1-220ENST00000639841 CPA2P48052 419 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CD151P48509 253 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 PTDSS1P48651 473 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 ANTXR2P58335 489 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 TUBB4BP68371 445 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 KCNJ10P78508 379 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 FAM189BP81408 668 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 TBL3Q12788 808 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 SNTB1Q13884 538 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MANEALQ5VSG8 457 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CDC42EP5Q6NZY7 148 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 ARHGEF18Q6ZSZ5 1173 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 BMP8AQ7Z5Y6 402 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MFSD4AQ8N468 514 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 ANKRD44Q8N8A2 993 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 RTL3Q8N8U3 475 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MRPL43Q8N983 215 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CNNM3Q8NE01 707 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 RNF139Q8WU17 664 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CTNNBL1Q8WYA6 563 aaPredicted RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CORO2AQ92828 525 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 DEFB118Q96PH6 123 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 TTPALQ9BTX7 342 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 SPATS2LQ9NUQ6 558 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 AURKCQ9UQB9 309 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 HPSEQ9Y251 543 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 RUVBL1Q9Y265 456 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 PLEKHM1Q9Y4G2 1056 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 RFX7Q2KHR2 1363 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 RNF103-CHMP3A0A140T963 221 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 SNAP23O00161 211 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 RNF103O00237 685 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MCF2LO15068 1137 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 SLC25A17O43808 307 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 PEX11AO75192 247 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 RTN2O75298 545 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 TMEM11P17152 192 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 PTPN3P26045 913 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 ANP32AP39687 249 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 PREPP48147 710 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 CAMLGP49069 296 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 MRPL12P52815 198 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 BOP1Q14137 746 aaKnown RBP7.6□□□□□ -1.19
NECAP1-220ENST00000639841 DGKDQ16760 1214 aa7.6□□□□□ -1.19
NECAP1-220ENST00000639841 GAB4Q2WGN9 574 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms