RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ISCUQ9H1K1 167 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 IMPAD1Q9NX62 359 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 IGSF9Q9P2J2 1179 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PCDHGB4Q9UN71 923 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 DIMT1Q9UNQ2 313 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 B3GNT3Q9Y2A9 372 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 KIF13AQ9H1H9 1805 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 OR6C75A6NL08 312 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 O00370 1275 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 KCNA5P22460 613 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RPS3AP61247 264 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 COPZ1P61923 177 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PAK1Q13153 545 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 FADDQ13158 208 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SLC39A6Q13433 755 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SNAPC2Q13487 334 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 GRM3Q14832 879 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TIGD6Q17RP2 521 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF829Q3KNS6 432 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PERM1Q5SV97 790 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RABEPKQ7Z6M1 372 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ERI1Q8IV48 349 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CENPSQ8N2Z9 138 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF398Q8TD17 642 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TP53INP1Q96A56 240 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 COPS4Q9BT78 406 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SLC26A1Q9H2B4 701 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ECT2Q9H8V3 914 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NDUFB9Q9Y6M9 179 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 A0A0U1RQK1 487 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF320A2RRD8 509 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 H7C1Q1 480 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TFECO14948 347 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 DCLK1O15075 740 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RPP14O95059 124 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CYC1P08574 325 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ARP10275 920 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TXKP42681 527 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 HOXA1P49639 335 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 MEOX2P50222 304 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 YWHAHQ04917 246 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CYP24A1Q07973 514 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 POU6F1Q14863 301 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 KARSQ15046 597 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CYP2A13Q16696 494 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ME3Q16798 604 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CRTC2Q53ET0 693 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 MSANTD2Q6P1R3 559 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TRMT1LQ7Z2T5 733 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PAGE2Q7Z2X7 111 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 KBTBD2Q8IY47 623 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 LRRN4CLQ8ND94 238 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PRCCQ92733 491 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 C18orf8Q96DM3 657 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CCDC17Q96LX7 622 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 LRRC40Q9H9A6 602 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NR2E1Q9Y466 385 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 KCNE2Q9Y6J6 123 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NCOA1Q15788 1441 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RIMS2Q9UQ26 1411 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NUTM2BA6NNL0 878 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NUTM2EB1AL46 878 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TERTO14746 1132 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TREHO43280 583 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PFKFB2O60825 505 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 HUS1O60921 280 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 DEXIO95424 95 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CDK1P06493 297 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SELLP14151 372 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 DHPSP49366 369 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ANXA11P50995 505 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 GHRHRQ02643 423 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SMTNL2Q2TAL5 461 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 LIN9Q5TKA1 542 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 LRRC74BQ6ZQY2 392 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RRAGAQ7L523 313 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 EFL1Q7Z2Z2 1120 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NECAB2Q7Z6G3 386 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NUTM2AQ8IVF1 878 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CPSF7Q8N684 471 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RCBTB1Q8NDN9 531 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SIMC1Q8NDZ2 872 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 HIPK4Q8NE63 616 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RFFLQ8WZ73 363 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 DDX17Q92841 729 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 WNK4Q96J92 1243 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PNO1Q9NRX1 252 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TMEM260Q9NX78 707 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 BCAP29Q9UHQ4 241 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 APPL1Q9UKG1 709 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 AFF2P51816 1311 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ZBTB5O15062 677 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ACOX3O15254 700 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 GPRIN2O60269 458 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TMIGD3P0DMS9 266 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CYP2B6P20813 491 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CHMP24386 653 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RBL1P28749 1068 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 POLGP54098 1239 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NR1H2P55055 460 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms