RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ARSIQ5FYB1 569 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 C22orf39Q6P5X5 142 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 FBXL19Q6PCT2 694 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 DPY19L3Q6ZPD9 716 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 ERN2Q76MJ5 926 aaKnown RBP18.87■□□□□ 0.61
CLN6-220ENST00000637450 PDZD3Q86UT5 571 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 FAM131BQ86XD5 332 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 EPS8L1Q8TE68 723 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 KLK6Q92876 244 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 SPON2Q9BUD6 331 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 ZYG11BQ9C0D3 744 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 TNKS2Q9H2K2 1166 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 DYRK4Q9NR20 520 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 PPARGC1AQ9UBK2 798 aaKnown RBP18.87■□□□□ 0.61
CLN6-220ENST00000637450 IL36AQ9UHA7 158 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 LOC400499M0QZD8 3231 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 LEFTY1O75610 366 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 THEGLP0DJG4 465 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 PRLRP16471 622 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 RECQLP46063 649 aaPredicted RBP18.86■□□□□ 0.61
CLN6-220ENST00000637450 ILKQ13418 452 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 NAA35Q5VZE5 725 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 RETSATQ6NUM9 610 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 ZNF677Q86XU0 584 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 SLC25A45Q8N413 288 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 CEP44Q9C0F1 390 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 NUP62CLQ9H1M0 184 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 KLHL11Q9NVR0 708 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 ZFR2Q9UPR6 939 aaKnown RBP18.86■□□□□ 0.61
CLN6-220ENST00000637450 WASF2Q9Y6W5 498 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 ADAMTS20P59510 1910 aa18.86■□□□□ 0.61
CLN6-220ENST00000637450 NYNRINQ9P2P1 1898 aaKnown RBP18.86■□□□□ 0.61
CLN6-220ENST00000637450 ARID1BQ8NFD5 2236 aaPredicted RBP18.85■□□□□ 0.61
CLN6-220ENST00000637450 A0A087WV48 116 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 SDC3O75056 442 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 SERPINH1P50454 418 aaKnown RBP18.85■□□□□ 0.61
CLN6-220ENST00000637450 GNA12Q03113 381 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 TARDBPQ13148 414 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLN6-220ENST00000637450 COL9A2Q14055 689 aaPredicted RBP18.85■□□□□ 0.61
CLN6-220ENST00000637450 PROX2Q3B8N5 592 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 HES3Q5TGS1 186 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 EMC1Q8N766 993 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 GRIN3AQ8TCU5 1115 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 PPP1R16AQ96I34 528 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 MYOCQ99972 504 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 GANQ9H2C0 597 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 ATP13A1Q9HD20 1204 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 TAB2Q9NYJ8 693 aa18.85■□□□□ 0.61
CLN6-220ENST00000637450 NOCTQ9UK39 431 aaKnown RBP18.85■□□□□ 0.61
CLN6-220ENST00000637450 TRIM38O00635 465 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 SIGLEC6O43699 453 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 PCDH8O95206 1070 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 CYP1A1P04798 512 aaPredicted RBP18.84■□□□□ 0.61
CLN6-220ENST00000637450 HNRNPA2B1P22626 353 aaKnown RBP18.84■□□□□ 0.61
CLN6-220ENST00000637450 DGKAP23743 735 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 ACP1P24666 158 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 AKT2P31751 481 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 ADRA1BP35368 520 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 ARF5P84085 180 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 ATP11AP98196 1134 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 ZNF211Q13398 564 aaPredicted RBP18.84■□□□□ 0.61
CLN6-220ENST00000637450 TMEM259Q4ZIN3 620 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 RAB6CQ53S08 254 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 CARD16Q5EG05 197 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 SEL1L3Q68CR1 1132 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 CACTIN-AS1Q8N1I8 211 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 PCDH20Q8N6Y1 951 aaKnown RBP18.84■□□□□ 0.61
CLN6-220ENST00000637450 SLC20A1Q8WUM9 679 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 HEPHQ9BQS7 1158 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 RAB6CQ9H0N0 254 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 FZD3Q9NPG1 666 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 METTL5Q9NRN9 209 aaKnown RBP18.84■□□□□ 0.61
CLN6-220ENST00000637450 OR12D3Q9UGF7 316 aa18.84■□□□□ 0.61
CLN6-220ENST00000637450 CXorf51AA0A1B0GTR3 108 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 GFPT2O94808 682 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 CD160O95971 181 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 CHRNB2P17787 502 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 MMP8P22894 467 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 NEK3P51956 506 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 FMO1Q01740 532 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 CDR2Q01850 454 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 NRG1Q02297 640 aaPredicted RBP18.83■□□□□ 0.6
CLN6-220ENST00000637450 CCDC14Q49A88 953 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 ABI3BPQ7Z7G0 1075 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 DRC7Q8IY82 874 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 OR13H1Q8NG92 308 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 ENOX1Q8TC92 643 aaKnown RBP18.83■□□□□ 0.6
CLN6-220ENST00000637450 RXFP2Q8WXD0 754 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 RFFLQ8WZ73 363 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 NXPE2Q96DL1 559 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 OSBPL2Q9H1P3 480 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 RETREG1Q9H6L5 497 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 UCKL1Q9NWZ5 548 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 HS3ST3A1Q9Y663 406 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 IGSF10Q6WRI0 2623 aa18.83■□□□□ 0.6
CLN6-220ENST00000637450 DOCK9Q9BZ29 2069 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 ADRB3P13945 408 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 ITGB7P26010 798 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 L1CAMP32004 1257 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 KLK7P49862 253 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms