RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SEMA3GQ9NS98 782 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MRPL39Q9NYK5 338 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TAF6LQ9Y6J9 622 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 APC2O95996 2303 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 NFASCO94856 1347 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PTPRJQ12913 1337 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 CPSF4O95639 269 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 VTNP04004 478 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PDHA1P08559 390 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 CYP2D6P10635 497 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 RPS3AP61247 264 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 NR1D2Q14995 579 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 GLRA4Q5JXX5 417 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 VSTM1Q6UX27 236 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ALLCQ8N6M5 410 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 MAB21L3Q8N8X9 362 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 OR2AJ1Q8NGZ0 328 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DNAJB3Q8WWF6 145 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 SLC22A18Q96BI1 424 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 OSMRQ99650 979 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DPYSL5Q9BPU6 564 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 SMNDC1O75940 238 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 IFNAR1P17181 557 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DDX6P26196 483 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DENND5BQ6ZUT9 1274 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 CHSY3Q70JA7 882 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 THAP5Q7Z6K1 395 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PNPLA6Q8IY17 1366 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 A0A1W2PQ72 361 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 OGTO15294 1046 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DNAJA1P31689 397 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 BUD31P41223 144 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ADCYAP1R1P41586 468 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 FAM35AQ86V20 835 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 IQCF2Q8IXL9 164 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 CD99L2Q8TCZ2 262 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 NINJ1Q92982 152 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ATG4CQ96DT6 458 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 NSMCE3Q96MG7 304 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ADAM18Q9Y3Q7 739 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 POTEMA6NI47 508 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 KRT75O95678 551 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 SLC35G6P0C7Q6 338 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PLOD1Q02809 727 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ARMCX4Q5H9R4 360 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 POTEGQ6S5H5 508 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PJA1Q8NG27 643 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 CLHC1Q8NHS4 586 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 MDM1Q8TC05 714 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 KCNV2Q8TDN2 545 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 FOXJ1Q92949 421 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 GAL3ST3Q96A11 431 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PRRX2Q99811 253 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DNMT1P26358 1616 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 MAGEB16A2A368 324 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 KRT34O76011 436 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TPBGLP0DKB5 382 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 GALNTL6Q49A17 601 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TTC39BQ5VTQ0 682 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TYW3Q6IPR3 259 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 FRMD5Q7Z6J6 570 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PPP1R14BQ96C90 147 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 RAB11FIP5Q9BXF6 653 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TAS2R13Q9NYV9 303 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 SHROOM2Q13796 1616 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 RTN2O75298 545 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ACTR1BP42025 376 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM26Q6ZUK4 368 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 NT5MQ9NPB1 228 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 RAB6BQ9NRW1 208 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 GMIPQ9P107 970 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DKKL1Q9UK85 242 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PCDHB10Q9UN67 800 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PDCD5O14737 125 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TSPAN3O60637 253 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ALPIP09923 528 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 VDRP11473 427 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ZNF3P17036 446 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 CYP2C18P33260 490 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 SLC7A5Q01650 507 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 MYBPC3Q14896 1274 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 OTUD3Q5T2D3 398 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 HMGB4Q8WW32 186 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 GSDMCQ9BYG8 508 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 POLR1EQ9GZS1 481 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM8AQ9HCN3 771 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PDE7BQ9NP56 450 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 SATB2Q9UPW6 733 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 BPNT1O95861 308 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 RB1P06400 928 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ARSEP51690 589 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 RPS6P62753 249 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 ZC3H7AQ8IWR0 971 aaKnown RBP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 DAW1Q8N136 415 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 TRPS1Q9UHF7 1281 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 PCDHB2Q9Y5E7 798 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDKL5-205ENST00000623535 LOC100653049A0A140TA62 436 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 LRPAP1P30533 357 aa6.37□□□□□ -1.39
CDKL5-205ENST00000623535 CHRNB3Q05901 458 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms