RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CCNJLQ8IV13 435 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 SLC39A11Q8N1S5 342 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 PPP1R14CQ8TAE6 165 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 OXCT2Q9BYC2 517 aaPredicted RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 CCDC134Q9H6E4 229 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 CASS4Q9NQ75 786 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 PHTF1Q9UMS5 762 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 USP15Q9Y4E8 981 aaPredicted RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 BACE2Q9Y5Z0 518 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 ZNF840PA6NDX5 716 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 HOXC13P31276 330 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 SERPINB9P50453 376 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 RENBPP51606 427 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 DSC2Q02487 901 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 RASA2Q15283 850 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 ANKRD20A4Q4UJ75 823 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 KCNMB4Q86W47 210 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 SPATS2Q86XZ4 545 aaKnown RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 ARL10Q8N8L6 244 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 DENND1AQ8TEH3 1009 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 CCDC97Q96F63 343 aaPredicted RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 ZNF778Q96MU6 729 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 CYP2S1Q96SQ9 504 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 YIPF3Q9GZM5 350 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 NOL6Q9H6R4 1146 aaKnown RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 IL37Q9NZH6 218 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 PRKAG2Q9UGJ0 569 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 ZFP37Q9Y6Q3 630 aaPredicted RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 FAM92AA1XBS5 289 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 TPP1O14773 563 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 ACSL4O60488 711 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 SLC4A1P02730 911 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 BGNP21810 368 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 GMPRP36959 345 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 GJA8P48165 433 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 KPNA1P52294 538 aaPredicted RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 EPHB3P54753 998 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 C16orf46Q6P387 395 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 CDHR3Q6ZTQ4 885 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 RNF135Q8IUD6 432 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 PDZD8Q8NEN9 1154 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 PPHLN1Q8NEY8 458 aaKnown RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 ZNF75CPQ92670 426 aaPredicted RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 TSGA13Q96PP4 275 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 MECRQ9BV79 373 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 IL22Q9GZX6 179 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 TMEM248Q9NWD8 314 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 MOCS1Q9NZB8 636 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 PCDHB12Q9Y5F1 795 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 CHUKO15111 745 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 TM9SF1O15321 606 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 PSMD3O43242 534 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 TYK2P29597 1187 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 SLC6A4P31645 630 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 RFC2P35250 354 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 NPY2RP49146 381 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 LBX1P52954 281 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 WNT3AP56704 352 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 DSG1Q02413 1049 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 PDK4Q16654 411 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 KCTD11Q693B1 232 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 TMC7Q7Z402 723 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 OR7D4Q8NG98 312 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 EXOC2Q96KP1 924 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 FCRL5Q96RD9 977 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 CDK5RAP1Q96SZ6 601 aaKnown RBP10.09□□□□□ -0.79
VTA1-205ENST00000620996 DCTN4Q9UJW0 460 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 ZNF180Q9UJW8 692 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 ACTL7AQ9Y615 435 aa10.09□□□□□ -0.79
VTA1-205ENST00000620996 A0A0D9SEW6 157 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.08□□□□□ -0.8
VTA1-205ENST00000620996 SNX3O60493 162 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 GJB3O75712 270 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 C1QAP02745 245 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 NDST2P52849 883 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 STEAP4Q687X5 459 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 DNAJB7Q7Z6W7 309 aaPredicted RBP10.08□□□□□ -0.8
VTA1-205ENST00000620996 CMC1Q7Z7K0 106 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 PAF1Q8N7H5 531 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 VWCEQ96DN2 955 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 MTBPQ96DY7 904 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 IL12RB2Q99665 862 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 MANSC1Q9H8J5 431 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 NPHS2Q9NP85 383 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 KLHL14Q9P2G3 628 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
VTA1-205ENST00000620996 PATJQ8NI35 1801 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 TEX28O15482 410 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 RFPL1O75677 317 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 SNUPNO95149 360 aaKnown RBP10.08□□□□□ -0.8
VTA1-205ENST00000620996 VAPBO95292 243 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 ITGA2BP08514 1039 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 PPM1JQ5JR12 505 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 RABGAP1LQ5R372 815 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 FYB2Q5VWT5 728 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 RAPH1Q70E73 1250 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 MARK2Q7KZI7 788 aaKnown RBP10.08□□□□□ -0.8
VTA1-205ENST00000620996 UMODL1-AS1Q8N2C9 162 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 ATP2A3Q93084 1043 aa10.08□□□□□ -0.8
VTA1-205ENST00000620996 RNF38Q9H0F5 515 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms