RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CATSPER1Q8NEC5 780 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 TSNARE1Q96NA8 513 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 SLC2A13Q96QE2 648 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 GRIP2Q9C0E4 1043 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 FAM49AQ9H0Q0 323 aaPredicted RBP20.72■□□□□ 0.91
NEK3-208ENST00000618534 CDHR5Q9HBB8 845 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 ZBTB26Q9HCK0 441 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 GNEQ9Y223 722 aaKnown RBP20.72■□□□□ 0.91
NEK3-208ENST00000618534 RUVBL2Q9Y230 463 aaKnown RBP20.72■□□□□ 0.91
NEK3-208ENST00000618534 TSC2P49815 1807 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 SHROOM3Q8TF72 1996 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 PRSS51A0A1B0GVH4 220 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 ERI2A8K979 691 aaKnown RBP20.72■□□□□ 0.91
NEK3-208ENST00000618534 SLC35E2BP0CK96 405 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 NPY2RP49146 381 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 ART3Q13508 389 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 HERC3Q15034 1050 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 PDZD4Q76G19 769 aaPredicted RBP20.72■□□□□ 0.91
NEK3-208ENST00000618534 GALNT4Q8N4A0 578 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 STYXQ8WUJ0 223 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 HIC2Q96JB3 615 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 NPAS2Q99743 824 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 LRRC4Q9HBW1 653 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 GDAP2Q9NXN4 497 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 PTTG2Q9NZH5 202 aa20.72■□□□□ 0.91
NEK3-208ENST00000618534 COPG1Q9Y678 874 aaKnown RBP20.72■□□□□ 0.91
NEK3-208ENST00000618534 MAGEB16A2A368 324 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 BCAS2O75934 225 aaPredicted RBP20.71■□□□□ 0.91
NEK3-208ENST00000618534 NPR3P17342 541 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 TCN1P20061 433 aaPredicted RBP20.71■□□□□ 0.91
NEK3-208ENST00000618534 SEMA3BQ13214 749 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 IYDQ6PHW0 289 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 SLC41A1Q8IVJ1 513 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 CENPLQ8N0S6 344 aaPredicted RBP20.71■□□□□ 0.91
NEK3-208ENST00000618534 AHI1Q8N157 1196 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 SIX6OS1Q8N1H7 587 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 FSTL5Q8N475 847 aaPredicted RBP20.71■□□□□ 0.91
NEK3-208ENST00000618534 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.71■□□□□ 0.91
NEK3-208ENST00000618534 FAM156AQ8NDB6 213 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 TMA16Q96EY4 203 aaKnown RBP20.71■□□□□ 0.91
NEK3-208ENST00000618534 TNIP3Q96KP6 325 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 ZNF560Q96MR9 790 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 HNRNPABQ99729 332 aaKnown RBP20.71■□□□□ 0.91
NEK3-208ENST00000618534 MRPS26Q9BYN8 205 aaKnown RBP20.71■□□□□ 0.91
NEK3-208ENST00000618534 ADAMTS10Q9H324 1103 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 RHOJQ9H4E5 214 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 VTI1BQ9UEU0 232 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 BCAP29Q9UHQ4 241 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 LTBP3Q9NS15 1303 aa20.71■□□□□ 0.91
NEK3-208ENST00000618534 TMEM233B4DJY2 109 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 NRP1O14786 923 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 DDHD2O94830 711 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 TNFAIP8O95379 198 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 FYNP06241 537 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 ADCYAP1R1P41586 468 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 ZNF460Q14592 562 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 KLHDC10Q6PID8 442 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 EGFL6Q8IUX8 553 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 SULF1Q8IWU6 871 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 SLC16A10Q8TF71 515 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 PDCD6IPQ8WUM4 868 aaKnown RBP20.7■□□□□ 0.91
NEK3-208ENST00000618534 ZNF696Q9H7X3 374 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 EFCAB1Q9HAE3 211 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 WDR6Q9NNW5 1121 aaKnown RBP20.7■□□□□ 0.91
NEK3-208ENST00000618534 XPR1Q9UBH6 696 aa20.7■□□□□ 0.91
NEK3-208ENST00000618534 SMIM28A0A1B0GU29 152 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 CCDC160A6NGH7 325 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 ACOT8O14734 319 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 DLX3O60479 287 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 TADA2AO75478 443 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 VAPBO95292 243 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 ZBTB7AO95365 584 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 ASLP04424 464 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 GABRB3P28472 473 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 ADSLP30566 484 aaPredicted RBP20.7■□□□□ 0.9
NEK3-208ENST00000618534 HADHAP40939 763 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 PRKAA2P54646 552 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 SOX4Q06945 474 aaPredicted RBP20.7■□□□□ 0.9
NEK3-208ENST00000618534 LRRC8EQ6NSJ5 796 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 PAQR9Q6ZVX9 377 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 DLG3Q92796 817 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 PRPF18Q99633 342 aaKnown RBP20.7■□□□□ 0.9
NEK3-208ENST00000618534 UNKQ9C0B0 810 aaKnown RBP20.7■□□□□ 0.9
NEK3-208ENST00000618534 MROH8Q9H579 483 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 SNX10Q9Y5X0 201 aa20.7■□□□□ 0.9
NEK3-208ENST00000618534 TCAF2A6NFQ2 919 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 TARM1B6A8C7 271 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 ADM5C9JUS6 153 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 CD4P01730 458 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 TAF6P49848 677 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 PABPC1LQ4VXU2 614 aaKnown RBP20.69■□□□□ 0.9
NEK3-208ENST00000618534 LRRC23Q53EV4 343 aaPredicted RBP20.69■□□□□ 0.9
NEK3-208ENST00000618534 NOTUMQ6P988 496 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 PAOXQ6QHF9 649 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 SPATA6LQ8N4H0 392 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 CCNYL1Q8N7R7 359 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 DRAXINQ8NBI3 349 aaPredicted RBP20.69■□□□□ 0.9
NEK3-208ENST00000618534 PPP1R13LQ8WUF5 828 aa20.69■□□□□ 0.9
NEK3-208ENST00000618534 DNAJC1Q96KC8 554 aaKnown RBP20.69■□□□□ 0.9
NEK3-208ENST00000618534 ZFRQ96KR1 1074 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms