RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FADS3Q9Y5Q0 445 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 DGKBQ9Y6T7 804 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 HEATR9A2RTY3 570 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 FFAR2O15552 330 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 SDC3O75056 442 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 SLC2A3P11169 496 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 VDRP11473 427 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 GLB1P16278 677 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 WT1P19544 449 aaPredicted RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 ITGA3P26006 1051 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 L1CAMP32004 1257 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 MAN1A1P33908 653 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 GPR3P46089 330 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 KIAA1024LP59773 190 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 PEX6Q13608 980 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 ZRSR1Q15695 479 aaKnown RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 C1QL3Q5VWW1 255 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 LCLAT1Q6UWP7 414 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 INTS8Q75QN2 995 aaKnown RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 CCDC150Q8NCX0 1101 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 ARRDC3Q96B67 414 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 CENPTQ96BT3 561 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 FAM84AQ96KN4 292 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 CMKLR1Q99788 373 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 OSBPL1AQ9BXW6 950 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 KCTD10Q9H3F6 313 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 APOBEC3GQ9HC16 384 aaKnown RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 AKAP7Q9P0M2 348 aaPredicted RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 PDP2Q9P2J9 529 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 TMEM184BQ9Y519 407 aaPredicted RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 PCDHGA6Q9Y5G7 932 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 ARID1BQ8NFD5 2236 aaPredicted RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 A0A087X0B3 334 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 TSPAN11A1L157 253 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 KCNU1A8MYU2 1149 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 NUDT21O43809 227 aaKnown RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 IL1BP01584 269 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 GLI1P08151 1106 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 TACR2P21452 398 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CTSOP43234 321 aaPredicted RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 NASPP49321 788 aaPredicted RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 PMS2P54278 862 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 KRT83P78385 493 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 NFKB2Q00653 900 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 B4GALNT1Q00973 533 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 HLTFQ14527 1009 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNCA-213ENST00000618500 SKIDA1Q1XH10 827 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CERCAMQ5T4B2 595 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 TMEM164Q5U3C3 297 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 SPRED1Q7Z699 444 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 PCDH20Q8N6Y1 951 aaKnown RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 ZNF366Q8N895 744 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 ATP6V0D2Q8N8Y2 350 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 DCAF4L2Q8NA75 395 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 APOBEC4Q8WW27 367 aaKnown RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 SCG3Q8WXD2 468 aaKnown RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 RNF34Q969K3 372 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CCDC74AQ96AQ1 378 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 MOCOSQ96EN8 888 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 RBM15Q96T37 977 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNCA-213ENST00000618500 SLC17A9Q9BYT1 436 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 EPB41L5Q9HCM4 733 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNCA-213ENST00000618500 DONSONQ9NYP3 566 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 SARDHQ9UL12 918 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 COQ4Q9Y3A0 265 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 MAP4K5Q9Y4K4 846 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 ACACAQ13085 2346 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 A0A1W2PQM1 296 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 PMS2P1A4D2B8 440 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 PPP6R2O75170 966 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 GSRP00390 522 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 LTFP02788 710 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CTSLP07711 333 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 HMBSP08397 361 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 JMJD7P0C870 316 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 LIFP15018 202 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 JUNDP17535 347 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 TEAD1P28347 426 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CHRNA3P32297 505 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 NOS2P35228 1153 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 ACADSBP45954 432 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CCL7P80098 99 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 BIRC3Q13489 604 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CDKN3Q16667 212 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 FSCBQ5H9T9 825 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 SCARA5Q6ZMJ2 495 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 SETD3Q86TU7 594 aaPredicted RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 CACUL1Q86Y37 369 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CCNJLQ8IV13 435 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 KYQ8NBH2 561 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 RDH13Q8NBN7 331 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 TP53I13Q8NBR0 393 aaPredicted RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 RASSF8Q8NHQ8 419 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 SLC35F5Q8WV83 523 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 SEC14L1Q92503 715 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 USP7Q93009 1102 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 EPSTI1Q96J88 318 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 PSMB7Q99436 277 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 IL12RB2Q99665 862 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms