RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 CD300CQ08708 224 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SSRP1Q08945 709 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 KIF1AQ12756 1690 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SNTA1Q13424 505 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 NAB1Q13506 487 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 THOC5Q13769 683 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 DHX34Q14147 1143 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 HERC3Q15034 1050 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SLC39A14Q15043 492 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SPA17Q15506 151 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TAF5Q15542 800 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 DLG2Q15700 870 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TBCCQ15814 346 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CLUL1Q15846 466 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 NKG7Q16617 165 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 DDR2Q16832 855 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PFKFB3Q16875 520 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 ABCB5Q2M3G0 1257 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 LRIT3Q3SXY7 679 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ZBED5Q49AG3 693 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SFT2D3Q587I9 215 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TMEM67Q5HYA8 995 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 BRMS1LQ5PSV4 323 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 RTP2Q5QGT7 225 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PPM1LQ5SGD2 360 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SNAP47Q5SQN1 464 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TTC39AQ5SRH9 613 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 AADACL4Q5VUY2 407 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 C1orf146Q5VVC0 180 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PRAMEF13Q5VWM6 474 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 KANK2Q63ZY3 851 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 STYK1Q6J9G0 422 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TTI2Q6NXR4 508 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PRMT9Q6P2P2 845 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 NFRKBQ6P4R8 1299 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 FBXL19Q6PCT2 694 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MROH5Q6ZUA9 1318 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CCDC149Q6ZUS6 474 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ZNF767PQ75MW2 155 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 UTS2BQ765I0 119 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SPATC1Q76KD6 591 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MILR1Q7Z6M3 343 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CLNKQ7Z7G1 428 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SETD3Q86TU7 594 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 IGFN1Q86VF2 1251 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TDRPQ86YL5 185 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 NPAS4Q8IUM7 802 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 LACC1Q8IV20 430 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 RASGRP3Q8IV61 690 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 HERC6Q8IVU3 1022 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 BBS7Q8IWZ6 715 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CCDC36Q8IYA8 594 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SYTL1Q8IYJ3 562 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 LRRC71Q8N4P6 559 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 FNDC5Q8NAU1 212 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PSD4Q8NDX1 1056 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 COL22A1Q8NFW1 1626 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 OR6P1Q8NGX9 317 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MCOLN3Q8TDD5 553 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ACTRT1Q8TDG2 376 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 RAPGEF6Q8TEU7 1601 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SETD7Q8WTS6 366 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 S100ZQ8WXG8 99 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 KLHL6Q8WZ60 621 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SMG7Q92540 1137 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 LPGAT1Q92604 370 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CELF1Q92879 486 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 MAP4K1Q92918 833 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 NKD2Q969F2 451 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 MYDGFQ969H8 173 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 UBE2FQ969M7 185 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 DACT3Q96B18 629 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 ISOC1Q96CN7 298 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 EXOC2Q96KP1 924 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TMEM68Q96MH6 324 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 RIPOR3Q96MK2 946 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ZNF560Q96MR9 790 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 FRMD6Q96NE9 622 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TOX2Q96NM4 488 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ZNF347Q96SE7 839 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CDK5RAP1Q96SZ6 601 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 PPP1R16BQ96T49 567 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PIP5K1AQ99755 562 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MCMBPQ9BTE3 642 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.57□□□□□ -1.84
SMC5-204ENST00000618375 TRAF4Q9BUZ4 470 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 KIFC3Q9BVG8 833 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 KIFC1Q9BW19 673 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TLR10Q9BXR5 811 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TTYH3Q9C0H2 523 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MTFR1LQ9H019 292 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ZMYND12Q9H0C1 365 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MIR1-1HGQ9H1L0 117 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SLC6A15Q9H2J7 730 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 EPB41L4BQ9H329 900 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TMEM245Q9H330 911 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TRIT1Q9H3H1 467 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 GHITMQ9H3K2 345 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 NARFLQ9H6Q4 476 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TUFT1Q9NNX1 390 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms