RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 AGAP9Q5VTM2 703 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 HGSNATQ68CP4 663 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 SLC30A9Q6PML9 568 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 TMPRSS6Q8IU80 811 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 ANKMY2Q8IV38 441 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 OR10Q1Q8NGQ4 319 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 EDAQ92838 391 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 TMPRSS4Q9NRS4 437 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 GPR34Q9UPC5 381 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 H0Y858 1186 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 RBPJQ06330 500 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 DHX34Q14147 1143 aaKnown RBP11.07□□□□□ -0.64
POLR2A-209ENST00000617998 DMC1Q14565 340 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 LINGO4Q6UY18 593 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 C1orf186Q6ZWK4 172 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 PHC3Q8NDX5 983 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 ATL1Q8WXF7 558 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 TRIM15Q9C019 465 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 XAB2Q9HCS7 855 aaKnown RBP11.07□□□□□ -0.64
POLR2A-209ENST00000617998 KRCC1Q9NPI7 259 aaPredicted RBP11.07□□□□□ -0.64
POLR2A-209ENST00000617998 COMMD8Q9NX08 183 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 KCNK4Q9NYG8 393 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 MPP6Q9NZW5 540 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 PLAGL2Q9UPG8 496 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 TPH1P17752 444 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 HNF4AP41235 474 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■■■■□ 21.3
POLR2A-209ENST00000617998 EPHB4P54760 987 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 CCDC137Q6PK04 289 aaKnown RBP11.07□□□□□ -0.64
POLR2A-209ENST00000617998 KIRREL3Q8IZU9 778 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 EID3Q8N140 333 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 SERTAD3Q9UJW9 196 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 CASKO14936 926 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 TPD52L2O43399 206 aaKnown RBP11.07□□□□□ -0.64
POLR2A-209ENST00000617998 GGCXP38435 758 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 VIPR2P41587 438 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 ARHGAP25P42331 645 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 RASSF2P50749 326 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 GTF2BQ00403 316 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 MCL1Q07820 350 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 FAAP100Q0VG06 881 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 PPP1R15BQ5SWA1 713 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 ARL14Q8N4G2 192 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 PCED1BQ96HM7 432 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 PRKAB1Q9Y478 270 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 C4BP0C0L5 1744 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 MFAP3LO75121 409 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 GJB6O95452 261 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ATP1A3P13637 1013 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 IGFALSP35858 605 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 SEPHS1P49903 392 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ABCE1P61221 599 aaKnown RBP11.06□□□□□ -0.64
POLR2A-209ENST00000617998 LRRC14Q15048 493 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 LRRC49Q8IUZ0 686 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 C12orf29Q8N999 325 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 PLEKHA8Q96JA3 519 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 BRINP2Q9C0B6 783 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 A0A1B0GUA9 196 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 DGKAP23743 735 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 KDM7AQ6ZMT4 941 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ZNF366Q8N895 744 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 PPP1R14AQ96A00 147 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 GFM1Q96RP9 751 aaKnown RBP11.06□□□□□ -0.64
POLR2A-209ENST00000617998 SLC39A8Q9C0K1 460 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 KIF17Q9P2E2 1029 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 COPS7AQ9UBW8 275 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 FAM227AF5H4B4 570 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 CMPK1P30085 196 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 SLC8A1P32418 973 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 TRPC1P48995 793 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 NOVA1P51513 510 aaKnown RBP11.06□□□□□ -0.64
POLR2A-209ENST00000617998 KBTBD12Q3ZCT8 623 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ANKRD54Q6NXT1 300 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 TAPT1Q6NXT6 567 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 HDAC7Q8WUI4 952 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ARMC5Q96C12 935 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 EFHD1Q9BUP0 239 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 PDE7BQ9NP56 450 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ARL15Q9NXU5 204 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 FBXW2Q9UKT8 454 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.06□□□□□ -0.64
POLR2A-209ENST00000617998 IRAK2O43187 625 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 TGM5O43548 720 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 LDOC1O95751 146 aaPredicted RBP11.06□□□□□ -0.64
POLR2A-209ENST00000617998 BMPR2Q13873 1038 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ARSIQ5FYB1 569 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 CACHD1Q5VU97 1274 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 GIMAP7Q8NHV1 300 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 UBE2Q2Q8WVN8 375 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 SNX8Q9Y5X2 465 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 RGPD1P0DJD0 1748 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 GTPBP1O00178 669 aaKnown RBP11.06□□□□□ -0.64
POLR2A-209ENST00000617998 USP49Q70CQ1 688 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 CMTM8Q8IZV2 173 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 ZFYVE19Q96K21 471 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 TMEM121Q9BTD3 319 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 FGFR1OP2Q9NVK5 253 aa11.06□□□□□ -0.64
POLR2A-209ENST00000617998 DUSP10Q9Y6W6 482 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms