RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	NAT8L	Q8N9F0	302 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	SNX31	Q8N9S9	440 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	XXYLT1	Q8NBI6	393 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	LRTOMT	Q8WZ04	291 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	PEX13	Q92968	403 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	LENG8	Q96PV6	779 aa	Predicted RBP	11.74	□□□□□ -0.53
TP53-222	ENST00000617185	MMP19	Q99542	508 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	SGIP1	Q9BQI5	828 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	AIFM2	Q9BRQ8	373 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	ELP3	Q9H9T3	547 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	FANCE	Q9HB96	536 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	AKIP1	Q9NQ31	210 aa		11.74	□□□□□ -0.53
TP53-222	ENST00000617185	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.74	□□□□□ -0.53
TP53-222	ENST00000617185	ACOT8	O14734	319 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	AURKA	O14965	403 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	USP2	O75604	605 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	KCNH1	O95259	989 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	UGT2B4	P06133	528 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	ITGAV	P06756	1048 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NCAM1	P13591	858 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	FGFR3	P22607	806 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	LEPR	P48357	1165 aa	Known RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	MAPK10	P53779	464 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	ATXN3	P54252	364 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NME5	P56597	212 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NLRP11	P59045	1033 aa	Known RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	ACTR2	P61160	394 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	PRKCE	Q02156	737 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	RALGDS	Q12967	914 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NPTX1	Q15818	432 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NEDD8	Q15843	81 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	C2CD6	Q53TS8	623 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	ANKRD22	Q5VYY1	191 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CATSPERG	Q6ZRH7	1159 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	LINC00299	Q6ZSB3	139 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SLC22A16	Q86VW1	577 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CCDC28A	Q8IWP9	274 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CTAGE3P	Q8IX95	158 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	C4orf19	Q8IY42	314 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CACTIN-AS1	Q8N1I8	211 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NSUN6	Q8TEA1	469 aa	Known RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	POMGNT1	Q8WZA1	660 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CPT1B	Q92523	772 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	DPF3	Q92784	378 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SEMA4D	Q92854	862 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	PGBD4	Q96DM1	585 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	FEM1C	Q96JP0	617 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	TEX13B	Q9BXU2	312 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	JPH1	Q9HDC5	661 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SNTG2	Q9NY99	539 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SSC5D	A1L4H1	1573 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	KIAA1217	Q5T5P2	1943 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185		H7C0C1	242 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	HNRNPDL	O14979	420 aa	Known RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SNPH	O15079	494 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	PGK2	P07205	417 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CRHR1	P34998	444 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SLC26A2	P50443	739 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	PRKAA2	P54646	552 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	BASP1	P80723	227 aa	Known RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	DMP1	Q13316	513 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SNRNP35	Q16560	246 aa	Known RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	FASTKD1	Q53R41	847 aa	Known RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	MTX3	Q5HYI7	312 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SLC39A4	Q6P5W5	647 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	KIAA0408	Q6ZU52	694 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	PGAM4	Q8N0Y7	254 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	TMEM161B	Q8NDZ6	487 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	C8orf48	Q96LL4	319 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CALN1	Q9BXU9	219 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	EMILIN2	Q9BXX0	1053 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	ATP13A3	Q9H7F0	1226 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	ACAD9	Q9H845	621 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SP140L	Q9H930	580 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	MAGEE1	Q9HCI5	957 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	DSE	Q9UL01	958 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	TBX20	Q9UMR3	447 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	TCAF1	Q9Y4C2	921 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SNX13	Q9Y5W8	968 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	RGSL1	A5PLK6	1076 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	LRRIQ4	A6NIV6	560 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SNTN	A6NMZ2	147 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	EVPLL	A8MZ36	301 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CFLAR	O15519	480 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	ZBTB14	O43829	449 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	MAN1A2	O60476	641 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	RFPL1	O75677	317 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	SEC24D	O94855	1032 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	KRT8	P05787	483 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	CYP11B1	P15538	503 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NAGA	P17050	411 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	GJC1	P36383	396 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	WNT7B	P56706	349 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	NIPAL4	Q0D2K0	466 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	GALNT1	Q10472	559 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
TP53-222	ENST00000617185	KIAA1841	Q6NSI8	718 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	HERC6	Q8IVU3	1022 aa		11.73	□□□□□ -0.53
TP53-222	ENST00000617185	PNPT1	Q8TCS8	783 aa	Known RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms