RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 ATP5F1P24539 256 aaPredicted RBP17.95■□□□□ 0.46
ATXN2-227ENST00000616825 PRAMEF19Q5SWL8 479 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 PLEKHA7Q6IQ23 1121 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 FAM183BPQ6ZVS7 135 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 LRRC52Q8N7C0 313 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 RABGEF1Q9UJ41 708 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 LRCH1Q9Y2L9 728 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 TPRKBQ9Y3C4 175 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 PTCH2Q9Y6C5 1203 aa17.95■□□□□ 0.46
ATXN2-227ENST00000616825 TRAV19A0A0A6YYK7 116 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 PDE2AO00408 941 aaPredicted RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 CBX6O95503 412 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 ERCC2P18074 760 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 NFKB1P19838 968 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 IFNGR2P38484 337 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 CLCN5P51795 746 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 ATP13A4Q4VNC1 1196 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 INTS11Q5TA45 600 aaKnown RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 OR5B17Q8NGF7 314 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 OR6Y1Q8NGX8 325 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 SEMA4BQ9NPR2 832 aaPredicted RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 ASAH2Q9NR71 780 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 INVSQ9Y283 1065 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 POLR1DQ9Y2S0 133 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 ASTN1O14525 1302 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 WTIPA6NIX2 430 aaPredicted RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 ATP9AO75110 1047 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 SP3Q02447 781 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 INAQ16352 499 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 RORBQ92753 470 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 C9orf16Q9BUW7 83 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 IGFLR1Q9H665 355 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 PCYOX1Q9UHG3 505 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 MAPRE3Q9UPY8 281 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 HS6ST1O60243 411 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 EPN2O95208 641 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 TTPAP49638 278 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 POLNQ7Z5Q5 900 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 PHF13Q86YI8 300 aaPredicted RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 POMGNT2Q8NAT1 580 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 SNRNP27Q8WVK2 155 aaKnown RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 USP7Q93009 1102 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 ZNF670Q9BS34 389 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.94■□□□□ 0.464e-13■■■■□ 22
ATXN2-227ENST00000616825 ATP13A3Q9H7F0 1226 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 SORCS3Q9UPU3 1222 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 URB1O60287 2271 aaKnown RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 SPATA31C2B4DYI2 1134 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 KPNA5O15131 536 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 CD3EAPO15446 510 aaKnown RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 FAM20BO75063 409 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 CXCR2P25025 360 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 DRG2P55039 364 aaKnown RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 PTPRNQ16849 979 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 PIWIL4Q7Z3Z4 852 aaKnown RBP17.94■□□□□ 0.46
ATXN2-227ENST00000616825 ATAD3AQ9NVI7 634 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 SATB2Q9UPW6 733 aa17.94■□□□□ 0.46
ATXN2-227ENST00000616825 LIASO43766 372 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 VAV1P15498 845 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 GSTA3Q16772 222 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 EEF1DP3Q658K8 133 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 SERPINA13PQ6UXR4 307 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 GRIN3AQ8TCU5 1115 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 AHCYL2Q96HN2 611 aaKnown RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 OMDQ99983 421 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 AKAP7Q9P0M2 348 aaPredicted RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 NTRK1P04629 796 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 COX7A2P14406 83 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 SMAD3P84022 425 aaKnown RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 OR8H2Q8N162 312 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 TBCDQ9BTW9 1192 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 PIPSLA2A3N6 862 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 GSSP48637 474 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 CRADDP78560 199 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 C19orf18Q8NEA5 215 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 IL31RAQ8NI17 732 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 ANKRD49Q8WVL7 239 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 ELMO1Q92556 727 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 CNGB3Q9NQW8 809 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 BCL10O95999 233 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 TFEBP19484 476 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 CRYBB1P53674 252 aaPredicted RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 NOMO3P69849 1222 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 FMO1Q01740 532 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 METTL3Q86U44 580 aaKnown RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 COLGALT2Q8IYK4 626 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 ZCCHC7Q8N3Z6 543 aaKnown RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 PTGR2Q8N8N7 351 aaPredicted RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 NMD3Q96D46 503 aaKnown RBP17.93■□□□□ 0.46
ATXN2-227ENST00000616825 TMEM237Q96Q45 408 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 ST3GAL5Q9UNP4 418 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 ACTL7BQ9Y614 415 aa17.93■□□□□ 0.46
ATXN2-227ENST00000616825 PXDNQ92626 1479 aa17.92■□□□□ 0.46
ATXN2-227ENST00000616825 SMIM31A0A1B0GVY4 71 aa17.92■□□□□ 0.46
ATXN2-227ENST00000616825 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
ATXN2-227ENST00000616825 TPP1O14773 563 aa17.92■□□□□ 0.46
ATXN2-227ENST00000616825 SCAMP3O14828 347 aaKnown RBP17.92■□□□□ 0.46
ATXN2-227ENST00000616825 ATP6V1G2O95670 118 aa17.92■□□□□ 0.46
ATXN2-227ENST00000616825 MYL12AP19105 171 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms