RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 GALNT12Q8IXK2 581 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 ZSCAN5AQ9BUG6 496 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 ZCCHC11Q5TAX3 1644 aaKnown RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 RGL2O15211 777 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 NR3C2P08235 984 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 HPCAL1P37235 193 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 BST1Q10588 318 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 ZRANB3Q5FWF4 1079 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 FASTKD5Q7L8L6 764 aaKnown RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 GFM1Q96RP9 751 aaKnown RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 CRISPLD1Q9H336 500 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 ERVK-11Q9UQG0 969 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 NEXMIFQ5QGS0 1516 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 PRAMEF33A0A0G2JMD5 474 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 PRAMEF10O60809 474 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 EIF4BP23588 611 aaKnown RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 RBP5P82980 135 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 KIAA0895Q8NCT3 520 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 XKR8Q9H6D3 395 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 DNAJC28Q9NX36 388 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 LEF1Q9UJU2 399 aaPredicted RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 ISPDA4D126 451 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 GH1P01241 217 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 RRM1P23921 792 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 HIRAP54198 1017 aaPredicted RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 PTSQ03393 145 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 DUS1LQ6P1R4 473 aaKnown RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHD1-212ENST00000614616 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 CENPSQ8N2Z9 138 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 MPP5Q8N3R9 675 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 ZNF420Q8TAQ5 688 aaPredicted RBP13.93□□□□□ -0.18
CHD1-212ENST00000614616 EEF1AKMT1Q8WVE0 214 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 ASB12Q8WXK4 309 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 NODALQ96S42 347 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 TBX20Q9UMR3 447 aa13.93□□□□□ -0.18
CHD1-212ENST00000614616 UPP2O95045 317 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 IDO1P14902 403 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 GRIA4P48058 902 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 GDI2P50395 445 aaKnown RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 RBM48Q5RL73 367 aaKnown RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 ANKRD26P1Q6NSI1 321 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 DEF8Q6ZN54 512 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 PARP8Q8N3A8 854 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 SLC20A1Q8WUM9 679 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 RCN3Q96D15 328 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 ZNF512BQ96KM6 892 aaPredicted RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 TOR3AQ9H497 397 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 EXD2Q9NVH0 621 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 KIF1AQ12756 1690 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 OR6C70A6NIJ9 312 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 GDF11O95390 407 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 CYP2C9P11712 490 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 GABRB2P47870 512 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 RGS7P49802 495 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 GEMP55040 296 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 GOLGA7BQ2TAP0 167 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 PHC2Q8IXK0 858 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 SLC7A14Q8TBB6 771 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 TBATAQ96M53 351 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 BIRC8Q96P09 236 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 SNX9Q9Y5X1 595 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 CRYZL1O95825 349 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 C6orf222P0C671 652 aaPredicted RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 PSKH1P11801 424 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 EIF2B5Q13144 721 aaKnown RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 WDR59Q6PJI9 974 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 FBXO30Q8TB52 745 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 CLPTM1LQ96KA5 538 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 JPH1Q9HDC5 661 aaPredicted RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 RGS14O43566 566 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 PIGNO95427 931 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 ITGA2P17301 1181 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 NOS3P29474 1203 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 URGCPQ8TCY9 931 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 RAP2CQ9Y3L5 183 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 METTL21EPA6NDL7 271 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 C5orf60A6NFR6 353 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 ZSCAN5BA6NJL1 495 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 UBXN8O00124 270 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 PLOD2O00469 737 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 PLA2G6O60733 806 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 C9P02748 559 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 PRKCBP05771 671 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 MOGQ16653 247 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 ZNF572Q7Z3I7 529 aaPredicted RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 FCGR1BQ92637 280 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 PHF24Q9UPV7 400 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 DGAT1O75907 488 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 NELFEP18615 380 aaKnown RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 MAN1C1Q9NR34 630 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 AP4E1Q9UPM8 1137 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 CPSF4O95639 269 aaKnown RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 CYP11B2P19099 503 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 GPD2P43304 727 aa13.92□□□□□ -0.18
CHD1-212ENST00000614616 LSM14AQ8ND56 463 aaKnown RBP13.92□□□□□ -0.18
CHD1-212ENST00000614616 TLCD1Q96CP7 247 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms