RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NDUFV2P19404 249 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 PEX5P50542 639 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 COPAP53621 1224 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 RHOAP61586 193 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 SNRPD1P62314 119 aaKnown RBP13.51□□□□□ -0.25
MDC1-209ENST00000613547 DYNLT1P63172 113 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 RFTN1Q14699 578 aaPredicted RBP13.51□□□□□ -0.25
MDC1-209ENST00000613547 PPP2R5EQ16537 467 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 TAZQ16635 292 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 TTC31Q49AM3 519 aaPredicted RBP13.51□□□□□ -0.25
MDC1-209ENST00000613547 C9orf64Q5T6V5 341 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 KAZNQ674X7 775 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 TIGD7Q6NT04 549 aaPredicted RBP13.51□□□□□ -0.25
MDC1-209ENST00000613547 LEKR1Q6ZMV7 388 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 BBS5Q8N3I7 341 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 NELL1Q92832 810 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 HES6Q96HZ4 224 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 TPSD1Q9BZJ3 242 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 MKRN2Q9H000 416 aaKnown RBP13.51□□□□□ -0.25
MDC1-209ENST00000613547 RSPH9Q9H1X1 276 aaPredicted RBP13.51□□□□□ -0.25
MDC1-209ENST00000613547 MTG2Q9H4K7 406 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 CD248Q9HCU0 757 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 SCML1Q9UN30 329 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 HEY1Q9Y5J3 304 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 C1QTNF3-AMACRE9PGA6 284 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 J3KR12 359 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
MDC1-209ENST00000613547 MCF2LO15068 1137 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 CST8O60676 142 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 NEBLO76041 1014 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 TMCC1O94876 653 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 ADH1BP00325 375 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 GSRP00390 522 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 IL1BP01584 269 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 KRT10P13645 584 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 VAV1P15498 845 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 TGM2P21980 687 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 PTPN7P35236 360 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 GARSP41250 739 aaKnown RBP13.5□□□□□ -0.25
MDC1-209ENST00000613547 NR2C2P49116 596 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 GBE1Q04446 702 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 RAD51Q06609 339 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 GALNT2Q10471 571 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 TCF15Q12870 199 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 PDK1Q15118 436 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 RPS6KA1Q15418 735 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 CARD16Q5EG05 197 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 FAM46CQ5VWP2 391 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 C11orf74Q86VG3 221 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 PLPP6Q8IY26 295 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 STK40Q8N2I9 435 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 RYBPQ8N488 228 aaPredicted RBP13.5□□□□□ -0.25
MDC1-209ENST00000613547 PLD5Q8N7P1 536 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 ZBTB44Q8NCP5 570 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 CCNYQ8ND76 341 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 OR2AP1Q8NGE2 309 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 OR2A12Q8NGT7 310 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 ALG3Q92685 438 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 P3H4Q92791 437 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
MDC1-209ENST00000613547 GDAP1L1Q96MZ0 367 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 CINPQ9BW66 212 aaPredicted RBP13.5□□□□□ -0.25
MDC1-209ENST00000613547 OSBPL8Q9BZF1 889 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 BRD8Q9H0E9 1235 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 TNKS2Q9H2K2 1166 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 PDFQ9HBH1 243 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 TRMT1Q9NXH9 659 aaKnown RBP13.5□□□□□ -0.25
MDC1-209ENST00000613547 DTLQ9NZJ0 730 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 SEPT3Q9UH03 358 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 PACSIN2Q9UNF0 486 aaPredicted RBP13.5□□□□□ -0.25
MDC1-209ENST00000613547 EFR3BQ9Y2G0 817 aa13.5□□□□□ -0.25
MDC1-209ENST00000613547 MUC6Q6W4X9 2439 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 MAFKO60675 156 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
MDC1-209ENST00000613547 TJP3O95049 919 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 CD160O95971 181 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 IGSF6O95976 241 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 PRNPP04156 253 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 RENBPP51606 427 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 RPS14P62263 151 aaKnown RBP13.49□□□□□ -0.25
MDC1-209ENST00000613547 DMWDQ09019 674 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 ZNF235Q14590 738 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 LBRQ14739 615 aaKnown RBP13.49□□□□□ -0.25
MDC1-209ENST00000613547 CST6Q15828 149 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 SEL1L2Q5TEA6 688 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 MEI1Q5TIA1 1274 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 ARHGAP36Q6ZRI8 547 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 BBS12Q6ZW61 710 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 CEP68Q76N32 757 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 CACUL1Q86Y37 369 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 MMAAQ8IVH4 418 aaKnown RBP13.49□□□□□ -0.25
MDC1-209ENST00000613547 REXO1L1PQ8IX06 675 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 NETO2Q8NC67 525 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 TSGA13Q96PP4 275 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 HEPHQ9BQS7 1158 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 HEMGNQ9BXL5 484 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 TM6SF2Q9BZW4 377 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 NCKAP1Q9Y2A7 1128 aa13.49□□□□□ -0.25
MDC1-209ENST00000613547 MUC22E2RYF6 1773 aaPredicted RBP13.48□□□□□ -0.25
MDC1-209ENST00000613547 CACNA1HO95180 2353 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms