RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 HSPA13P48723 471 aa8.81□□□□□ -1
LIG4-204ENST00000611712 SLC10A2Q12908 348 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 BIRC2Q13490 618 aa8.81□□□□□ -1
LIG4-204ENST00000611712 ARL13AQ5H913 290 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 CXCL17Q6UXB2 119 aa8.81□□□□□ -1
LIG4-204ENST00000611712 SPATA22Q8NHS9 363 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CNDP1Q96KN2 507 aa8.81□□□□□ -1
LIG4-204ENST00000611712 LENG8Q96PV6 779 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 MIPEPQ99797 713 aa8.81□□□□□ -1
LIG4-204ENST00000611712 EIF2B3Q9NR50 452 aaKnown RBP8.81□□□□□ -1
LIG4-204ENST00000611712 PIGVQ9NUD9 493 aa8.81□□□□□ -1
LIG4-204ENST00000611712 SIRPGQ9P1W8 387 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CACNG4Q9UBN1 327 aa8.81□□□□□ -1
LIG4-204ENST00000611712 PGAP2Q9UHJ9 254 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CDH22Q9UJ99 828 aa8.81□□□□□ -1
LIG4-204ENST00000611712 ST3GAL5Q9UNP4 418 aa8.81□□□□□ -1
LIG4-204ENST00000611712 PSAT1Q9Y617 370 aa8.81□□□□□ -1
LIG4-204ENST00000611712 hCG_2014768A0A024R1R8 64 aa8.81□□□□□ -1
LIG4-204ENST00000611712 NR5A2O00482 541 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CCDC166P0CW27 439 aa8.81□□□□□ -1
LIG4-204ENST00000611712 SP100P23497 879 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 PPARGP37231 505 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 ACTR3P61158 418 aa8.81□□□□□ -1
LIG4-204ENST00000611712 PLOD1Q02809 727 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 TMED1Q13445 227 aa8.81□□□□□ -1
LIG4-204ENST00000611712 LAMB3Q13751 1172 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CYP2R1Q6VVX0 501 aa8.81□□□□□ -1
LIG4-204ENST00000611712 FBXW8Q8N3Y1 598 aa8.81□□□□□ -1
LIG4-204ENST00000611712 FBXO32Q969P5 355 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CCDC138Q96M89 665 aa8.81□□□□□ -1
LIG4-204ENST00000611712 PGLYRP2Q96PD5 576 aa8.81□□□□□ -1
LIG4-204ENST00000611712 NR1H4Q96RI1 486 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 ZBTB18Q99592 522 aa8.81□□□□□ -1
LIG4-204ENST00000611712 DNAJC28Q9NX36 388 aa8.81□□□□□ -1
LIG4-204ENST00000611712 IGSF9Q9P2J2 1179 aa8.81□□□□□ -1
LIG4-204ENST00000611712 BAG5Q9UL15 447 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CRYL1Q9Y2S2 319 aa8.81□□□□□ -1
LIG4-204ENST00000611712 LRRC42Q9Y546 428 aa8.81□□□□□ -1
LIG4-204ENST00000611712 TRPV2Q9Y5S1 764 aa8.81□□□□□ -1
LIG4-204ENST00000611712 PTCH2Q9Y6C5 1203 aa8.81□□□□□ -1
LIG4-204ENST00000611712 VAV1P15498 845 aa8.81□□□□□ -1
LIG4-204ENST00000611712 PSMC3P17980 439 aa8.81□□□□□ -1
LIG4-204ENST00000611712 CYP3A5P20815 502 aa8.81□□□□□ -1
LIG4-204ENST00000611712 AIF1P55008 147 aa8.81□□□□□ -1
LIG4-204ENST00000611712 TMEM259Q4ZIN3 620 aa8.81□□□□□ -1
LIG4-204ENST00000611712 ANO7Q6IWH7 933 aa8.81□□□□□ -1
LIG4-204ENST00000611712 ZFP1Q6P2D0 407 aa8.81□□□□□ -1
LIG4-204ENST00000611712 RP9Q8TA86 221 aaKnown RBP8.81□□□□□ -1
LIG4-204ENST00000611712 UTP4Q969X6 686 aaKnown RBP8.81□□□□□ -1
LIG4-204ENST00000611712 MAML3Q96JK9 1138 aa8.81□□□□□ -1
LIG4-204ENST00000611712 ZNF512Q96ME7 567 aaPredicted RBP8.81□□□□□ -1
LIG4-204ENST00000611712 EGFL8Q99944 293 aa8.81□□□□□ -1
LIG4-204ENST00000611712 ING2Q9H160 280 aa8.81□□□□□ -1
LIG4-204ENST00000611712 GBA3Q9H227 469 aa8.81□□□□□ -1
LIG4-204ENST00000611712 FAM105AQ9NUU6 356 aa8.81□□□□□ -1
LIG4-204ENST00000611712 GID8Q9NWU2 228 aa8.81□□□□□ -1
LIG4-204ENST00000611712 SFMBT1Q9UHJ3 866 aa8.81□□□□□ -1
LIG4-204ENST00000611712 PCDHB12Q9Y5F1 795 aa8.81□□□□□ -1
LIG4-204ENST00000611712 V9GYQ6 96 aa8.81□□□□□ -1
LIG4-204ENST00000611712 TCRBV5S1A1TA0A578 114 aa8.8□□□□□ -1
LIG4-204ENST00000611712 SLC12A8A0AV02 714 aa8.8□□□□□ -1
LIG4-204ENST00000611712 TRAFD1O14545 582 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 ABLIM1O14639 778 aa8.8□□□□□ -1
LIG4-204ENST00000611712 MRASO14807 208 aa8.8□□□□□ -1
LIG4-204ENST00000611712 BUD23O43709 281 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 GLP2RO95838 553 aa8.8□□□□□ -1
LIG4-204ENST00000611712 TFEBP19484 476 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ATP5F1P24539 256 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 NMBRP28336 390 aa8.8□□□□□ -1
LIG4-204ENST00000611712 BRCC3P46736 316 aa8.8□□□□□ -1
LIG4-204ENST00000611712 GLUD2P49448 558 aa8.8□□□□□ -1
LIG4-204ENST00000611712 TBX4P57082 545 aa8.8□□□□□ -1
LIG4-204ENST00000611712 DAOAP59103 153 aa8.8□□□□□ -1
LIG4-204ENST00000611712 HFE2Q6ZVN8 426 aa8.8□□□□□ -1
LIG4-204ENST00000611712 PIWIL4Q7Z3Z4 852 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 SLC22A9Q8IVM8 553 aa8.8□□□□□ -1
LIG4-204ENST00000611712 PCED1BQ96HM7 432 aa8.8□□□□□ -1
LIG4-204ENST00000611712 FCRL2Q96LA5 508 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 FAM192AQ9GZU8 254 aa8.8□□□□□ -1
LIG4-204ENST00000611712 RGS18Q9NS28 235 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ABCC13Q9NSE7 274 aa8.8□□□□□ -1
LIG4-204ENST00000611712 NDUFA13Q9P0J0 144 aa8.8□□□□□ -1
LIG4-204ENST00000611712 RAD54BQ9Y620 910 aa8.8□□□□□ -1
LIG4-204ENST00000611712 MYH9P35579 1960 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 EME2A4GXA9 379 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 NCF1BA6NI72 391 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 NCF1CA8MVU1 366 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 SMNDC1O75940 238 aaKnown RBP eCLIP8.8□□□□□ -1
LIG4-204ENST00000611712 MT-CYBP00156 380 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 PYGLP06737 847 aa8.8□□□□□ -1
LIG4-204ENST00000611712 NCF1P14598 390 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 TSPAN8P19075 237 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CHRM3P20309 590 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CYP2C18P33260 490 aa8.8□□□□□ -1
LIG4-204ENST00000611712 SCNN1AP37088 669 aa8.8□□□□□ -1
LIG4-204ENST00000611712 SERPINH1P50454 418 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 MAXP61244 160 aa8.8□□□□□ -1
LIG4-204ENST00000611712 PITX1P78337 314 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 PKN3Q6P5Z2 889 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ENDOVQ8N8Q3 282 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms