RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TCF7L2Q9NQB0 619 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CHRAC1Q9NRG0 131 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TMPRSS4Q9NRS4 437 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CATSPERZQ9NTU4 200 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 THG1LQ9NWX6 298 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 RNF186Q9NXI6 227 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 DTLQ9NZJ0 730 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CFAP97Q9P2B7 532 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SPASTQ9UBP0 616 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 AGO1Q9UL18 857 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 PNMA8BQ9ULN7 279 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 DNAJC25-GNG10A0A024R161 153 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 IGKV6D-21A0A0A0MT36 114 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FCHO1O14526 889 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CBX6O95503 412 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TYMPP19971 482 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 STX5Q13190 355 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 STARD3Q14849 445 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ACOX1Q15067 660 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TRIP10Q15642 601 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FUT11Q495W5 492 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FNDC3BQ53EP0 1204 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 C16orf89Q6UX73 402 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TRIML2Q8N7C3 387 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 OR7D4Q8NG98 312 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 DDX1Q92499 740 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 PTPN18Q99952 460 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SPATA16Q9BXB7 569 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SLC4A5Q9BY07 1137 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 C12orf65Q9H3J6 166 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FAM124BQ9H5Z6 455 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 COG4Q9H9E3 785 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CAB39LQ9H9S4 337 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 RCOR3Q9P2K3 495 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 MYH7P12883 1935 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 NWD2Q9ULI1 1742 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 C1orf232A0A0U1RR37 186 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CCL16O15467 120 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 AKAP10O43572 662 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 PIGNO95427 931 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 KCNE1P15382 129 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 L1CAMP32004 1257 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 HALP42357 657 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 PRMT2P55345 433 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 LRRC74AQ0VAA2 488 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 HSPA14Q0VDF9 509 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SMARCB1Q12824 385 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 PRKAA1Q13131 559 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CRYMQ14894 314 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 PTPRNQ16849 979 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TEDDM1Q5T9Z0 273 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 FBXL19Q6PCT2 694 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 EFL1Q7Z2Z2 1120 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TRMT11Q7Z4G4 463 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SETD3Q86TU7 594 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TRABD2AQ86V40 505 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ZNF567Q8N184 647 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TEX9Q8N6V9 391 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 HJURPQ8NCD3 748 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SLC35F5Q8WV83 523 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM40Q8WWA1 233 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 MFSD3Q96ES6 412 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CATSPER2Q96P56 530 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM237Q96Q45 408 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 HAPLN2Q9GZV7 340 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ING2Q9H160 280 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 MID1IP1Q9NPA3 183 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CYLDQ9NQC7 956 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 PIGVQ9NUD9 493 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ZMYND8Q9ULU4 1186 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TOGARAM1Q9Y4F4 1720 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 KAT6AQ92794 2004 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 IGKV6-21A0A0C4DH24 114 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 BCLAF3A2AJT9 711 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 MEIS3P2A8K0S8 358 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 KCNU1A8MYU2 1149 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CCL22O00626 93 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ZNF865P0CJ78 1059 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 MSH3P20585 1137 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SNRPD1P62314 119 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ESRRGP62508 458 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 BST1Q10588 318 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 NR6A1Q15406 480 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 AGKQ53H12 422 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 RARS2Q5T160 578 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 GPR158Q5T848 1215 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 RNASEH2BQ5TBB1 312 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ANKS6Q68DC2 871 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ERAP2Q6P179 960 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 KYAT3Q6YP21 454 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 RD3Q7Z3Z2 195 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ARL14EPQ8N8R7 260 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 KCTD4Q8WVF5 259 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 IRGQQ8WZA9 623 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SUSD6Q92537 303 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 MS4A4AQ96JQ5 239 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 THUMPD3Q9BV44 507 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 MECRQ9BV79 373 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 UNC93B1Q9H1C4 597 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 RXFP1Q9HBX9 757 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms