RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 XPNPEP3Q9NQH7 507 aa12.13□□□□□ -0.47
TP53-220ENST00000610623 UTP6Q9NYH9 597 aaKnown RBP12.13□□□□□ -0.47
TP53-220ENST00000610623 TMEM216Q9P0N5 145 aa12.13□□□□□ -0.47
TP53-220ENST00000610623 LRRC37A2A6NM11 1700 aa12.13□□□□□ -0.47
TP53-220ENST00000610623 AKAP10O43572 662 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 PTPN2P17706 415 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 TPSB2P20231 275 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 TRAP1Q12931 704 aaKnown RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 BNIP3Q12983 259 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 PPIL2Q13356 520 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 PTK2BQ14289 1009 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 TPSAB1Q15661 275 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 CYP4A22Q5TCH4 519 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 GPR107Q5VW38 600 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 GPAT2Q6NUI2 795 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 NPNTQ6UXI9 565 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 CCDC60Q8IWA6 550 aaPredicted RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 ZNF786Q8N393 782 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 ANKFN1Q8N957 763 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 MFSD2AQ8NA29 543 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 RNF169Q8NCN4 708 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 TAMM41Q96BW9 452 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 ZMAT2Q96NC0 199 aaKnown RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 ACO2Q99798 780 aaKnown RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 PSD2Q9BQI7 771 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 DRC3Q9H069 523 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 SNX13Q9Y5W8 968 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 BCLAF3A2AJT9 711 aaKnown RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 KRBA1A5PL33 1030 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 KPNA7A9QM74 516 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 C9IYK1 514 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 PLOD2O00469 737 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 PFDN6O15212 129 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 HDAC3O15379 428 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 GCATO75600 419 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 VAPBO95292 243 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 TRUB2O95900 331 aaKnown RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 NME5P56597 212 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 NIPAL4Q0D2K0 466 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 PMS2P3Q13401 168 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 PRKG1Q13976 671 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 RAB39AQ14964 217 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 LSM12Q3MHD2 195 aaKnown RBP12.12□□□□□ -0.47
TP53-220ENST00000610623 MTX3Q5HYI7 312 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 STEAP4Q687X5 459 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 ILDR2Q71H61 639 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 SLC15A4Q8N697 577 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 MINDY2Q8NBR6 621 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 SLC4A11Q8NBS3 891 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 TANKQ92844 425 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 CIB1Q99828 191 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 ZBTB26Q9HCK0 441 aa12.12□□□□□ -0.47
TP53-220ENST00000610623 TMX2-CTNND1H3BSU7 103 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 CSPG5O95196 566 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 BMP2P12643 396 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 CD1EP15812 388 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 CD247P20963 164 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 MIPP30301 263 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 ATXN3P54252 364 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 ITGADQ13349 1161 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 OXA1LQ15070 435 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 ZNF534Q76KX8 674 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 ARMCX6Q7L4S7 300 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 JOSD2Q8TAC2 188 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 BSNDQ8WZ55 320 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 ACDQ96AP0 544 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 DHRS1Q96LJ7 313 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 ZNF641Q96N77 438 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 MROQ9BYG7 248 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 RBAKQ9NYW8 714 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 PCSK1NQ9UHG2 260 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 A0A0G2JLL6 359 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 GOLGA8QA0A0J9YX86 632 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 TCRBV3S1A0A5B6 114 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 GOLGA8OA6NCC3 632 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 GOLGA8NF8WBI6 632 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 STX16-NPEPL1H3BU86 382 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 CXCL11O14625 94 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 PAPSS1O43252 624 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 KDM1AO60341 852 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 DGKIO75912 1065 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 CCNA2P20248 432 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 TYK2P29597 1187 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 GNL1P36915 607 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 GSSP48637 474 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 TMBIM6P55061 237 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 PRAMEP78395 509 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 NFATC3Q12968 1075 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 PHKG1Q16816 387 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 PPP6R3Q5H9R7 873 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 SEL1L3Q68CR1 1132 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 SCARA3Q6AZY7 606 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms