RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 BDNFP23560 247 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 ADRA1DP25100 572 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 PTDSS1P48651 473 aaKnown RBP13.23□□□□□ -0.29
USP6NL-205ENST00000609104 ARPINQ7Z6K5 226 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 AGAP11Q8TF27 550 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 IL22Q9GZX6 179 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CLIC5Q9NZA1 410 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CAMSAP1Q5T5Y3 1602 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 STAT5AP42229 794 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 BACE1P56817 501 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 EPS8Q12929 822 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 FAM171A1Q5VUB5 890 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 C4orf19Q8IY42 314 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 OFCC1Q8IZS5 231 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 AENQ8WTP8 325 aaKnown RBP13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 TMCC2O75069 709 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 RPTNQ6XPR3 784 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 ZBTB46Q86UZ6 589 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 IPCEF1Q8WWN9 437 aaPredicted RBP13.23□□□□□ -0.29
USP6NL-205ENST00000609104 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CHRNGP07510 517 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 MMP13P45452 471 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 GRIA4P48058 902 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CKAP2Q8WWK9 683 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 PRMT6Q96LA8 375 aaPredicted RBP13.23□□□□□ -0.29
USP6NL-205ENST00000609104 SNX6Q9UNH7 406 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 PCDHB5Q9Y5E4 795 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 HYIQ5T013 277 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CLIP3Q96DZ5 547 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CCDC189A1A4V9 331 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 IGSF6O95976 241 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 FAM220AQ7Z4H9 259 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 OR52L1Q8NGH7 329 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 RGSL1A5PLK6 1076 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 TTMPQ5BVD1 217 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 CHST7Q9NS84 486 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
USP6NL-205ENST00000609104 ARMC8Q8IUR7 673 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 ULK2Q8IYT8 1036 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 DEFB106AQ8N104 65 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 OR52K1Q8NGK4 314 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 VCPIP1Q96JH7 1222 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 DNAJC1Q96KC8 554 aaKnown RBP13.23□□□□□ -0.29
USP6NL-205ENST00000609104 PCDHB12Q9Y5F1 795 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 GTF2A2P52657 109 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 QPRTQ15274 297 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 FAM25EA8MYX2 175 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 PPP4CP60510 307 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 ST3GAL1Q11201 340 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 ARHGAP36Q6ZRI8 547 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 PSTKQ8IV42 348 aaKnown RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 SLC2A14Q8TDB8 520 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 RPS6KA6Q9UK32 745 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 MTF2Q9Y483 593 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 SGTAO43765 313 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 CST1P01037 141 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 LIN54Q6MZP7 749 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 NDNQ99608 321 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 SPAG4Q9NPE6 437 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 HOXA2O43364 376 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 TSPAN9O75954 239 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 ABATP80404 500 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 ARMC12Q5T9G4 340 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 ZNF549Q6P9A3 640 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 USP45Q70EL2 814 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 TXNRD3Q86VQ6 643 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 CREG2Q8IUH2 290 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 AMER2Q8N7J2 671 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 EEF1AKMT1Q8WVE0 214 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 DDX3XO00571 662 aaKnown RBP eCLIP13.22□□□□□ -0.293e-25■■□□□ 13.7
USP6NL-205ENST00000609104 KPNA5O15131 536 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 FARP2O94887 1054 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 ADSSP30520 456 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 POLR2LP62875 67 aaKnown RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 FAM171BQ6P995 826 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 AGMOQ6ZNB7 445 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 NANOGNBQ7Z5D8 188 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 PLEKHH3Q7Z736 793 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 QKIQ96PU8 341 aaKnown RBP eCLIP13.22□□□□□ -0.293e-11■■■■■ 70
USP6NL-205ENST00000609104 TMEM150BA6NC51 233 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 PEX11AO75192 247 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 KDELR1P24390 212 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 GRIK4Q16099 956 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 NFE2Q16621 373 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 MAPKAPK3Q16644 382 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 PHF11Q9UIL8 331 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 RAB21Q9UL25 225 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 FAM205AQ6ZU69 1335 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 CYP2A6P11509 494 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-205ENST00000609104 ANPEPP15144 967 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 TGFBR2P37173 567 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 POLNQ7Z5Q5 900 aa13.22□□□□□ -0.29
USP6NL-205ENST00000609104 Q96MT0 163 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms