RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 CD48P09326 243 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 CORO1AP31146 461 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 LILRA4P59901 499 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 WASHC2DQ5SRD0 308 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 LRRC74BQ6ZQY2 392 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 MON1AQ86VX9 555 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 KCNMB4Q86W47 210 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TMEM175Q9BSA9 504 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 KLHL4Q9C0H6 718 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 COG4Q9H9E3 785 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 PTPRJQ12913 1337 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 MSI1O43347 362 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TRIM16O95361 564 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 CREB1P16220 341 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 POLR2LP62875 67 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 PYDC1Q8WXC3 89 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 PHF21BQ96EK2 531 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 C17orf80Q9BSJ5 609 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TM6SF2Q9BZW4 377 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 PACSIN3Q9UKS6 424 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 SLC38A8A6NNN8 435 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ENTPD5O75356 428 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TIMP1P01033 207 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 DNTTP04053 509 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 MRPS5P82675 430 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TAF5Q15542 800 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 SNX30Q5VWJ9 437 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 STK32AQ8WU08 396 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 HHIPL1Q96JK4 782 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 UNC5CO95185 931 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 STMN1P16949 149 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 MPP3Q13368 585 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 IRF5Q13568 498 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ZNF572Q7Z3I7 529 aaPredicted RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 C1orf127Q8N9H9 656 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TIFAQ96CG3 184 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 SNRNP25Q9BV90 132 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 NOCTQ9UK39 431 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 SERPINA4P29622 427 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 HOXD13P35453 343 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 NCALDP61601 193 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 GALNTL6Q49A17 601 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ARMC12Q5T9G4 340 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 USP45Q70EL2 814 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 GLT6D1Q7Z4J2 308 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ARL14EPQ8N8R7 260 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 GDPD5Q8WTR4 605 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 CASP10Q92851 521 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ZW10O43264 779 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 CFHP08603 1231 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 SLC34A1Q06495 639 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 MGAT5Q09328 741 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 PCED1BQ96HM7 432 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 MYOCQ99972 504 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 LPIN3Q9BQK8 851 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ACSS2Q9NR19 701 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 TBC1D14Q9P2M4 693 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ITGB6P18564 788 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 FAM83EQ2M2I3 478 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 TTLL9Q3SXZ7 439 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 AARS2Q5JTZ9 985 aaKnown RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 GRTP1Q5TC63 336 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 NAIF1Q69YI7 327 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 TRMT11Q7Z4G4 463 aaKnown RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 LENG9Q96B70 501 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ACBD6Q9BR61 282 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 CLPBQ9H078 707 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 CAAP1Q9H8G2 361 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 XPNPEP1Q9NQW7 623 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 FBXO6Q9NRD1 293 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 DRG1Q9Y295 367 aaKnown RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 IFRD1O00458 451 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 LYPLA1O75608 230 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 CNTFP26441 200 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ADSSP30520 456 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ZNF143P52747 638 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 SLC10A6Q3KNW5 377 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 MRNIPQ6NTE8 343 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 TMEM192Q8IY95 271 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 LZTR1Q8N653 840 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 OR52K1Q8NGK4 314 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 TBC1D10AQ9BXI6 508 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 CDHR5Q9HBB8 845 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 A0A0U1RQF3 1178 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 TRPC5OSA6NMA1 111 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 SMNDC1O75940 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 OTOAQ7RTW8 1153 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 ZSCAN18Q8TBC5 510 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-207ENST00000601372 THAP1Q9NVV9 213 aa11.22□□□□□ -0.61
ZNF558-207ENST00000601372 NR5A2O00482 541 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 CHADO15335 359 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 FGF10O15520 208 aaPredicted RBP11.21□□□□□ -0.61
ZNF558-207ENST00000601372 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms