RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 BBS5Q8N3I7 341 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 C12orf76Q8N812 135 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 SPATA22Q8NHS9 363 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 DDI1Q8WTU0 396 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 NAT9Q9BTE0 207 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 MUC3BQ9H195 1237 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 ATP13A1Q9HD20 1204 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 CCL26Q9Y258 94 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 MAD1L1Q9Y6D9 718 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 SHROOM3Q8TF72 1996 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 EXOC1LA0A1B0GW35 172 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 NPY2RP49146 381 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 SESN2P58004 480 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 RFTN1Q14699 578 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 KCTD16Q68DU8 428 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 CCDC117Q8IWD4 279 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 TDHQ8IZJ6 230 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 MPP5Q8N3R9 675 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 OR52K1Q8NGK4 314 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 TIFAQ96CG3 184 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 STAMBPL1Q96FJ0 436 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 IMP4Q96G21 291 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 STMN4Q9H169 189 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 UBP1Q9NZI7 540 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 BFARQ9NZS9 450 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 FETUBQ9UGM5 382 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 SMIM23A6NLE4 172 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 CYBBP04839 570 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 CEBPBP17676 345 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 MGAT1P26572 445 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 SLCO1A2P46721 670 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 ITKQ08881 620 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 MPP3Q13368 585 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 TMC5Q6UXY8 1006 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 DNAAF3Q8N9W5 541 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 VN1R2Q8NFZ6 395 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 FBF1Q8TES7 1133 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 CFAP36Q96G28 342 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 ACSS3Q9H6R3 686 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 TBC1D14Q9P2M4 693 aa17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 UBA2Q9UBT2 640 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-224ENST00000600718 CDH16O75309 829 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 MT-CYBP00156 380 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 WEE1P30291 646 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 CDH18Q13634 790 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 KLHL38Q2WGJ6 581 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 FSCBQ5H9T9 825 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 TDRPQ86YL5 185 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 MFN1Q8IWA4 741 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 RIBC1Q8N443 379 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 ZSWIM3Q96MP5 696 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 TBL1YQ9BQ87 522 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 FEM1AQ9BSK4 669 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 VPS45Q9NRW7 570 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 SEPT3Q9UH03 358 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 SLC24A2Q9UI40 661 aa17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 NOVA2Q9UNW9 492 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-224ENST00000600718 RFXAPO00287 272 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 USP12O75317 370 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 AGTP01019 485 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 STX2P32856 288 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 CDH17Q12864 832 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ZNF235Q14590 738 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ZSCAN26Q16670 478 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 RNF43Q68DV7 783 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 LEKR1Q6ZMV7 388 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 PRPF39Q86UA1 669 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ARID3BQ8IVW6 561 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 TNS4Q8IZW8 715 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 PGBD5Q8N414 524 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 FAM76AQ8TAV0 307 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ITFG1Q8TB96 612 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ING5Q8WYH8 240 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 TLCD1Q96CP7 247 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 XPO6Q96QU8 1125 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 POLR1EQ9GZS1 481 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 LGALS13Q9UHV8 139 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 OR51B4Q9Y5P0 310 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 MAGEB16A2A368 324 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 CBX4O00257 560 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 PRAMEF12O95522 483 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ATP5DP30049 168 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ADRA1AP35348 466 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 GEMIN4P57678 1058 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 NIPAL4Q0D2K0 466 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 USP4Q13107 963 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 OLIG2Q13516 323 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 RASA2Q15283 850 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 ZNF77Q15935 545 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 TNFAIP8L3Q5GJ75 292 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 STEAP4Q687X5 459 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 CASC4Q6P4E1 433 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 TMEM184AQ6ZMB5 413 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 UNC5AQ6ZN44 842 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 TPGS1Q6ZTW0 290 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 CYS1Q717R9 158 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 SH2D3CQ8N5H7 860 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 IPMKQ8NFU5 416 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 FIBINQ8TAL6 211 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms