RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 COL9A2Q14055 689 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 GAS6Q14393 721 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 PTPRNQ16849 979 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 KAZNQ674X7 775 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 PKN3Q6P5Z2 889 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 BBS12Q6ZW61 710 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 LONP2Q86WA8 852 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 SYNPOQ8N3V7 929 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 UCMAQ8WVF2 138 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 MYO19Q96H55 970 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 WDR24Q96S15 920 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 ACOX2Q99424 681 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 C2orf49Q9BVC5 232 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 MAK16Q9BXY0 300 aaKnown RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 OSBPL8Q9BZF1 889 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 CARD9Q9H257 536 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 ZDHHC4Q9NPG8 344 aa19.25■□□□□ 0.67
CCDC9-205ENST00000600117 THAP10Q9P2Z0 257 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-205ENST00000600117 WDFY3Q8IZQ1 3526 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 AKAP13Q12802 2813 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ARHGAP42A6NI28 874 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 TM4SF5O14894 197 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 FANCGO15287 622 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 KDELR3O43731 214 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 CST8O60676 142 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ATP1A1P05023 1023 aaKnown RBP19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ATP5BP06576 529 aaKnown RBP19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ZFXP17010 805 aaPredicted RBP19.24■□□□□ 0.67
CCDC9-205ENST00000600117 MSNP26038 577 aaKnown RBP19.24■□□□□ 0.67
CCDC9-205ENST00000600117 TIE1P35590 1138 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 VASPP50552 380 aaPredicted RBP19.24■□□□□ 0.67
CCDC9-205ENST00000600117 DYNLT1P63172 113 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ARF5P84085 180 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ECT2LQ008S8 904 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 SULT2A1Q06520 285 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 SRSF5Q13243 272 aaKnown RBP19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ENPP2Q13822 863 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 TFDP2Q14188 446 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 NPNTQ6UXI9 565 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ARHGAP36Q6ZRI8 547 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ZNF513Q8N8E2 541 aaPredicted RBP19.24■□□□□ 0.67
CCDC9-205ENST00000600117 KCNV2Q8TDN2 545 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ACDQ96AP0 544 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 HEMGNQ9BXL5 484 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 DTLQ9NZJ0 730 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 ERVW-1Q9UQF0 538 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 DMXL2Q8TDJ6 3036 aa19.24■□□□□ 0.67
CCDC9-205ENST00000600117 CBX4O00257 560 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 DFFAO00273 331 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 KCNK3O14649 394 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 MAP3K6O95382 1288 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 CD160O95971 181 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 PROS1P07225 676 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 SRPRAP08240 638 aaKnown RBP19.23■□□□□ 0.67
CCDC9-205ENST00000600117 CETN2P41208 172 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 STK19P49842 368 aaPredicted RBP19.23■□□□□ 0.67
CCDC9-205ENST00000600117 GALNT2Q10471 571 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 ZNF234Q14588 700 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 AASDHQ4L235 1098 aaPredicted RBP19.23■□□□□ 0.67
CCDC9-205ENST00000600117 C2orf27AQ580R0 203 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 FAM160A2Q8N612 972 aaPredicted RBP19.23■□□□□ 0.67
CCDC9-205ENST00000600117 IL17RCQ8NAC3 791 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 RPLP0P6Q8NHW5 317 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 PDFQ9HBH1 243 aa19.23■□□□□ 0.67
CCDC9-205ENST00000600117 CXorf51AA0A1B0GTR3 108 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 K7ESF4 209 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 PRAMEF11O60813 436 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 MT-CO1P00395 513 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 PECAM1P16284 738 aaPredicted RBP19.22■□□□□ 0.67
CCDC9-205ENST00000600117 TGM2P21980 687 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 IL12RB1P42701 662 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 KLF1Q13351 362 aaPredicted RBP19.22■□□□□ 0.67
CCDC9-205ENST00000600117 SEL1L2Q5TEA6 688 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 LINGO4Q6UY18 593 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 CCDC33Q8N5R6 958 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 ALLCQ8N6M5 410 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 KDM1BQ8NB78 822 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 CCDC26Q8TAB7 109 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 RPL10LQ96L21 214 aaKnown RBP19.22■□□□□ 0.67
CCDC9-205ENST00000600117 OLFM3Q96PB7 478 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 TMEM245Q9H330 911 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 CACNA2D2Q9NY47 1150 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 SLCO3A1Q9UIG8 710 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 HS3ST2Q9Y278 367 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 ACTL7AQ9Y615 435 aa19.22■□□□□ 0.67
CCDC9-205ENST00000600117 J3KR12 359 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 NPC1O15118 1278 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 MAFKO60675 156 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 ADAM23O75077 832 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 KLF8O95600 359 aaPredicted RBP19.21■□□□□ 0.67
CCDC9-205ENST00000600117 SRCP12931 536 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 HSF5Q4G112 596 aaPredicted RBP19.21■□□□□ 0.67
CCDC9-205ENST00000600117 NYAP1Q6ZVC0 841 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 CEP68Q76N32 757 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 TXNDC5Q8NBS9 432 aaKnown RBP19.21■□□□□ 0.67
CCDC9-205ENST00000600117 SAE1Q9UBE0 346 aaPredicted RBP19.21■□□□□ 0.67
CCDC9-205ENST00000600117 IPO11Q9UI26 975 aaKnown RBP19.21■□□□□ 0.67
CCDC9-205ENST00000600117 SLC25A13Q9UJS0 675 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 PLA2G4CQ9UP65 541 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms