RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 KRT1P04264 644 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 DRD3P35462 400 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 PLA2G5P39877 138 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 RGRP47804 291 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 PSMD8P48556 350 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 DNA2P51530 1060 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 CLCN6P51797 869 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 GBE1Q04446 702 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 ELAVL3Q14576 367 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 PAFAH1B3Q15102 231 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 TAZQ16635 292 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 POM121L1PQ3SYA9 428 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 CARD16Q5EG05 197 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 ATXN7L2Q5T6C5 722 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 FAM124AQ86V42 546 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 TMEFF1Q8IYR6 380 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 LZTR1Q8N653 840 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 CCDC112Q8NEF3 446 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 OR6K2Q8NGY2 324 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 TOE1Q96GM8 510 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 HERPUD2Q9BSE4 406 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 TM6SF2Q9BZW4 377 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 CEP44Q9C0F1 390 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 NEUROG2Q9H2A3 272 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 PABPC3Q9H361 631 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 IPO11Q9UI26 975 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 HPCAL4Q9UM19 191 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 WASF2Q9Y6W5 498 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 GPR179Q6PRD1 2367 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 CXorf51AA0A1B0GTR3 108 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 A0A1W2PP55 124 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 MUSKO15146 869 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 INSIG1O15503 277 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ZBTB24O43167 697 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 MAFKO60675 156 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ZNF217O75362 1048 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 GJB3O75712 270 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 PALMO75781 387 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 IL1BP01584 269 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 KRT10P13645 584 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 CHRNA3P32297 505 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ACSL1P33121 698 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 CDKN2BP42772 138 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 PTGER3P43115 390 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 PEX5P50542 639 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 KIF5AQ12840 1032 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 GSE1Q14687 1217 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ARSIQ5FYB1 569 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ZFYVE27Q5T4F4 411 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 PMS2CLQ68D20 193 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 NPNTQ6UXI9 565 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 NT5DC3Q86UY8 548 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 SLC41A1Q8IVJ1 513 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 MAP7D3Q8IWC1 876 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 PCDH20Q8N6Y1 951 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 PLD5Q8N7P1 536 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 PIP4K2CQ8TBX8 421 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 OR8D1Q8WZ84 308 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ALG3Q92685 438 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ISG20Q96AZ6 181 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ARRDC3Q96B67 414 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 FAM122AQ96E09 287 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 ZNF419Q96HQ0 510 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 SEMA4AQ9H3S1 761 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 FBRSQ9HAH7 460 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 CAPN6Q9Y6Q1 641 aa14.46□□□□□ -0.09
SHKBP1-217ENST00000598558 CKAP5Q14008 2032 aa14.46□□□□□ -0.1
SHKBP1-217ENST00000598558 TTC24A2A3L6 582 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 PSTPIP1O43586 416 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 FTCDO95954 541 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 DNTTP04053 509 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 ACADMP11310 421 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 TGM1P22735 817 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 CD6P30203 668 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 CCNHP51946 323 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 ZBTB16Q05516 673 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 IL10RBQ08334 325 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 SLC10A7Q0GE19 358 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 INO80DQ53TQ3 878 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 SLC9A4Q6AI14 798 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 AADACL2Q6P093 401 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 SPOCD1Q6ZMY3 1216 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 B4GALNT4Q76KP1 1039 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 ARMCX6Q7L4S7 300 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 ALYREFQ86V81 257 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 PLPP6Q8IY26 295 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 KATNAL2Q8IYT4 538 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 HDDC3Q8N4P3 179 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 TSEN2Q8NCE0 465 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 KIAA1524Q8TCG1 905 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 EXOC2Q96KP1 924 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 FBXL12Q9NXK8 326 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 DDX56Q9NY93 547 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 DONSONQ9NYP3 566 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 DTLQ9NZJ0 730 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 HECAQ9UBI9 543 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 UBA2Q9UBT2 640 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 GUCA1BQ9UMX6 200 aa14.45□□□□□ -0.1
SHKBP1-217ENST00000598558 PACSIN2Q9UNF0 486 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms