RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CD160O95971 181 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 PRNPP04156 253 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 MAT2AP31153 395 aaKnown RBP15.39■□□□□ 0.05
LIG1-215ENST00000597901 L1CAMP32004 1257 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 RECQLP46063 649 aaPredicted RBP15.39■□□□□ 0.05
LIG1-215ENST00000597901 MAPKAPK2P49137 400 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 DNA2P51530 1060 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 TAS2R38P59533 333 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 CCDC15Q0P6D6 951 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 CARD16Q5EG05 197 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 C22orf39Q6P5X5 142 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 DCUN1D2Q6PH85 259 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 PYROXD2Q8N2H3 581 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 CHCHD4Q8N4Q1 142 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 ARHGEF2Q92974 986 aaKnown RBP15.39■□□□□ 0.05
LIG1-215ENST00000597901 ARRDC3Q96B67 414 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 TBC1D31Q96DN5 1066 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 MCEEQ96PE7 176 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 CNPY3Q9BT09 278 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 CEP44Q9C0F1 390 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 MAGEH1Q9H213 219 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 IL36AQ9UHA7 158 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 ACTL7AQ9Y615 435 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 CXorf51AA0A1B0GTR3 108 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 TLR4O00206 839 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 FLRT2O43155 660 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 PCDHGA12O60330 932 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 SERPINC1P01008 464 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 PROS1P07225 676 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 ETFBP38117 255 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 SERPINH1P50454 418 aaKnown RBP15.38■□□□□ 0.05
LIG1-215ENST00000597901 OGDHQ02218 1023 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 SCAPQ12770 1279 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 MAMLD1Q13495 774 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 ASIC2Q16515 512 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 KLHL40Q2TBA0 621 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 PIP5KL1Q5T9C9 394 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 SFMBT2Q5VUG0 894 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 PPP1R2P3Q6NXS1 205 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 UNQ6494/PRO21346Q6UXR6 183 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 ZNF571Q7Z3V5 609 aaPredicted RBP15.38■□□□□ 0.05
LIG1-215ENST00000597901 GLRX5Q86SX6 157 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 SLCO6A1Q86UG4 719 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 TRIM69Q86WT6 500 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 PCDH20Q8N6Y1 951 aaKnown RBP15.38■□□□□ 0.05
LIG1-215ENST00000597901 HEPHQ9BQS7 1158 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 EDEM3Q9BZQ6 932 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 HAUS4Q9H6D7 363 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 PARVAQ9NVD7 372 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 FZD10Q9ULW2 581 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 BTBD3Q9Y2F9 522 aa15.38■□□□□ 0.05
LIG1-215ENST00000597901 FCF1Q9Y324 198 aaKnown RBP15.38■□□□□ 0.05
LIG1-215ENST00000597901 A0A1B0GTQ1 180 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 SYCE3A1L190 88 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 KDELR3O43731 214 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 RNGTTO60942 597 aaKnown RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 LEFTY1O75610 366 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 FTLP02792 175 aaPredicted RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 GZMAP12544 262 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 NUDT1P36639 197 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 STAT4Q14765 748 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 POLD3Q15054 466 aaPredicted RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 SLC45A4Q5BKX6 768 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 EFHC2Q5JST6 749 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 NAPEPLDQ6IQ20 393 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 PLEKHA7Q6IQ23 1121 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 NEK5Q6P3R8 708 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 ERN2Q76MJ5 926 aaKnown RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 PLPP6Q8IY26 295 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 PNPLA1Q8N8W4 532 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 MFSD2AQ8NA29 543 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 BAHD1Q8TBE0 780 aaPredicted RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 ISG20Q96AZ6 181 aaKnown RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 ELF4Q99607 663 aaPredicted RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 CDC6Q99741 560 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 HDAC8Q9BY41 377 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 PREBQ9HCU5 417 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 DYRK4Q9NR20 520 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 HECAQ9UBI9 543 aaPredicted RBP15.37■□□□□ 0.05
LIG1-215ENST00000597901 HPCAL4Q9UM19 191 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 NEU3Q9UQ49 428 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 DMTF1Q9Y222 760 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 WASF2Q9Y6W5 498 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 PCNX2A6NKB5 2137 aa15.37■□□□□ 0.05
LIG1-215ENST00000597901 A0A1W2PQU0 124 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 FAM221BA6H8Z2 402 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 TMEM8BA6NDV4 472 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 C1QTNF9BB2RNN3 333 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 RAMP2O60895 175 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 FTH1P19P0C7X4 201 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 C1QTNF9P0C862 333 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 SKILP12757 684 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 EPHB2P29323 1055 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 PRKCIP41743 596 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 CCT8P50990 548 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 AIF1P55008 147 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 IL9RQ01113 521 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 SHBQ15464 509 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 E4F1Q66K89 784 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms