RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 KLF6Q99612 283 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-207ENST00000597400 CCDC3Q9BQI4 270 aa11.17□□□□□ -0.62
ZNF548-207ENST00000597400 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
ZNF548-207ENST00000597400 SALL4Q9UJQ4 1053 aa11.17□□□□□ -0.62
ZNF548-207ENST00000597400 HS3ST2Q9Y278 367 aa11.17□□□□□ -0.62
ZNF548-207ENST00000597400 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
ZNF548-207ENST00000597400 CSNK1G3Q9Y6M4 447 aa11.17□□□□□ -0.62
ZNF548-207ENST00000597400 ITPR2Q14571 2701 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 SPTBN1Q01082 2364 aaKnown RBP11.16□□□□□ -0.62
ZNF548-207ENST00000597400 CLEC18AA5D8T8 446 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 NTN3O00634 580 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-207ENST00000597400 FBXO21O94952 628 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 PCDH8O95206 1070 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 PAK4O96013 591 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-207ENST00000597400 ITGB2P05107 769 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 CELA2BP08218 269 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-207ENST00000597400 PAEPP09466 180 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 JUNDP17535 347 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 RRM1P23921 792 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 CHRNA3P32297 505 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 UGT1A5P35504 534 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 MLLT3P42568 568 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-207ENST00000597400 DPYDQ12882 1025 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-207ENST00000597400 C1orf61Q13536 156 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 PDE1CQ14123 709 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-207ENST00000597400 CLCA4Q14CN2 919 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 NR0B2Q15466 257 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 TAF5Q15542 800 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 CNGA2Q16280 664 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 TCERG1LQ5VWI1 586 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 CLEC18BQ6UXF7 455 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 USP53Q70EK8 1073 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 CLEC18CQ8NCF0 446 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 LMX1AQ8TE12 382 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 PPP1R13BQ96KQ4 1090 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 FUCA2Q9BTY2 467 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 LRRC61Q9BV99 259 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 FOXP3Q9BZS1 431 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 SYNDIG1Q9H7V2 258 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 GGT7Q9UJ14 662 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 VPS28Q9UK41 221 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 ACSL6Q9UKU0 697 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 PCDHGA7Q9Y5G6 932 aa11.16□□□□□ -0.62
ZNF548-207ENST00000597400 ICE1Q9Y2F5 2266 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 H3BM21 787 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 PLD2O14939 933 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 ZNF821O75541 412 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-207ENST00000597400 RPL13P26373 211 aaKnown RBP11.15□□□□□ -0.62
ZNF548-207ENST00000597400 GPD2P43304 727 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 SPIDRQ14159 915 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 TBR1Q16650 682 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 EDRF1Q3B7T1 1238 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 ARSIQ5FYB1 569 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 TTC39BQ5VTQ0 682 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-207ENST00000597400 LINGO4Q6UY18 593 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 ERN2Q76MJ5 926 aaKnown RBP11.15□□□□□ -0.62
ZNF548-207ENST00000597400 C14orf80Q86SX3 495 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 TMIEQ8NEW7 156 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 SLC35C1Q96A29 364 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 VOPP1Q96AW1 172 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 RPRD1AQ96P16 312 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-207ENST00000597400 SEMA3CQ99985 751 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 HDAC8Q9BY41 377 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 SLC17A9Q9BYT1 436 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 CLPBQ9H078 707 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 EPN3Q9H201 632 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 TNKS2Q9H2K2 1166 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 EPB41L5Q9HCM4 733 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 ST7Q9NRC1 585 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 EVA1BQ9NVM1 165 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 VPS51Q9UID3 782 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 KIAA1257Q9ULG3 409 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 VANGL2Q9ULK5 521 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 PCDHB4Q9Y5E5 795 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 HS3ST3A1Q9Y663 406 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 NOTCH2Q04721 2471 aa11.15□□□□□ -0.62
ZNF548-207ENST00000597400 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 LRBAP50851 2863 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 ARHGEF17Q96PE2 2063 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-207ENST00000597400 SYNJ2BP-COX16A0A087WUM0 186 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 A0A1W2PQM1 296 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 D6RAR5 112 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 E5RJQ4 531 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 I6L893 689 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-207ENST00000597400 AGRPO00253 132 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 TPP1O14773 563 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 LEFTY1O75610 366 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 CNTN5O94779 1100 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 GJB6O95452 261 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 NTRK1P04629 796 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 LIPCP11150 499 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 EPB41P11171 864 aaKnown RBP11.14□□□□□ -0.63
ZNF548-207ENST00000597400 GP1BBP13224 206 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 ITIH1P19827 911 aa11.14□□□□□ -0.63
ZNF548-207ENST00000597400 ETV5P41161 510 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms