RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CCDC114Q96M63 670 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 SEMA4AQ9H3S1 761 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 SP110Q9HB58 689 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 LZTFL1Q9NQ48 299 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 ITM2CQ9NQX7 267 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 UBA2Q9UBT2 640 aaPredicted RBP14.63□□□□□ -0.07
LIG1-208ENST00000595758 PPP2R2CQ9Y2T4 447 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 PCDHA3Q9Y5H8 950 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 CCDC66A2RUB6 948 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 MCF2LO15068 1137 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 ALOX15BO15296 676 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 MAP3K13O43283 966 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 ZNF821O75541 412 aaPredicted RBP14.62□□□□□ -0.07
LIG1-208ENST00000595758 TMCC1O94876 653 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 DNTTP04053 509 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 C7P10643 843 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 CTNNA2P26232 953 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 CTNNA1P35221 906 aaKnown RBP14.62□□□□□ -0.07
LIG1-208ENST00000595758 CDKN2BP42772 138 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 IL10RBQ08334 325 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 SIM2Q14190 667 aaPredicted RBP14.62□□□□□ -0.07
LIG1-208ENST00000595758 CST6Q15828 149 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 TAZQ16635 292 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 CARD16Q5EG05 197 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 SPOCD1Q6ZMY3 1216 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 ARHGAP36Q6ZRI8 547 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 RFX6Q8HWS3 928 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 LRRC49Q8IUZ0 686 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 ATPAF2Q8N5M1 289 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 OR2A12Q8NGT7 310 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 RBM41Q96IZ5 413 aaKnown RBP14.62□□□□□ -0.07
LIG1-208ENST00000595758 SPACA7Q96KW9 195 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 KCNF1Q9H3M0 494 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 PDFQ9HBH1 243 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 CYP8B1Q9UNU6 501 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 CAPN6Q9Y6Q1 641 aa14.62□□□□□ -0.07
LIG1-208ENST00000595758 APOL1O14791 398 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 MFSD11O43934 449 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 FTCDO95954 541 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 ADH1BP00325 375 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 IL1BP01584 269 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 ZFXP17010 805 aaPredicted RBP14.61□□□□□ -0.07
LIG1-208ENST00000595758 CHRNA3P32297 505 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 SLC8A1P32418 973 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 PSMD8P48556 350 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 PEX5P50542 639 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 TPMTP51580 245 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 RWDD2BP57060 319 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 RHOAP61586 193 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 GBE1Q04446 702 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 GALNT2Q10471 571 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 SFSWAPQ12872 951 aaKnown RBP14.61□□□□□ -0.07
LIG1-208ENST00000595758 CYTH1Q15438 398 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 TTC31Q49AM3 519 aaPredicted RBP14.61□□□□□ -0.07
LIG1-208ENST00000595758 FAM46CQ5VWP2 391 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 SLC9A4Q6AI14 798 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 DPY19L3Q6ZPD9 716 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 PRR23BQ6ZRT6 265 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 C11orf74Q86VG3 221 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 CCDC50Q8IVM0 306 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 PLPP6Q8IY26 295 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 RYBPQ8N488 228 aaPredicted RBP14.61□□□□□ -0.07
LIG1-208ENST00000595758 FAM160A2Q8N612 972 aaPredicted RBP14.61□□□□□ -0.07
LIG1-208ENST00000595758 FRMD1Q8N878 549 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 CHST14Q8NCH0 376 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 GANCQ8TET4 914 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 TM6SF2Q9BZW4 377 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 EPC1Q9H2F5 836 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 PABPC3Q9H361 631 aaKnown RBP14.61□□□□□ -0.07
LIG1-208ENST00000595758 USP36Q9P275 1121 aaKnown RBP14.61□□□□□ -0.07
LIG1-208ENST00000595758 PPM1HQ9ULR3 514 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 SCML1Q9UN30 329 aa14.61□□□□□ -0.07
LIG1-208ENST00000595758 MIF4GDA9UHW6 222 aaKnown RBP14.6□□□□□ -0.07
LIG1-208ENST00000595758 PROB1E7EW31 1015 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 MID1O15344 667 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 MAFKO60675 156 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 GSRP00390 522 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 KRT10P13645 584 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 MX2P20592 715 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 C5AR1P21730 350 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 OXTRP30559 389 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 CCNHP51946 323 aaPredicted RBP14.6□□□□□ -0.07
LIG1-208ENST00000595758 SNRPD1P62314 119 aaKnown RBP14.6□□□□□ -0.07
LIG1-208ENST00000595758 DYNLT1P63172 113 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 CCDC173Q0VFZ6 552 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 TFDP2Q14188 446 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 RFTN1Q14699 578 aaPredicted RBP14.6□□□□□ -0.07
LIG1-208ENST00000595758 LLGL1Q15334 1064 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 TFDP3Q5H9I0 405 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 KAZNQ674X7 775 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 UBL4BQ8N7F7 174 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 PLD5Q8N7P1 536 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 TMIEQ8NEW7 156 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 OR2AP1Q8NGE2 309 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 ALG3Q92685 438 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 ZNF599Q96NL3 588 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 HEPHQ9BQS7 1158 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 CD93Q9NPY3 652 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 HECAQ9UBI9 543 aaPredicted RBP14.6□□□□□ -0.07
LIG1-208ENST00000595758 MBD1Q9UIS9 605 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms