RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ATP13A1Q9HD20 1204 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 VPS51Q9UID3 782 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 H3BRJ5 948 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 SNAP91O60641 907 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 KRT7P08729 469 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 SLC1A1P43005 524 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 STK19P49842 368 aaPredicted RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 TAS2R40P59535 323 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 CAMK2GQ13555 558 aaPredicted RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 POLD3Q15054 466 aaPredicted RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 HNRNPA1L2Q32P51 320 aaKnown RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 IL31Q6EBC2 164 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 GSPT2Q8IYD1 628 aaKnown RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 PGBD3Q8N328 593 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 RNF10Q8N5U6 811 aaKnown RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 LRRC1Q9BTT6 524 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 CAPN6Q9Y6Q1 641 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 CACNA1HO95180 2353 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 CBX4O00257 560 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 LILRB5O75023 590 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 GABRG2P18507 467 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 CNR2P34972 360 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 GJC1P36383 396 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 NBL1P41271 181 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 KRT81Q14533 505 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 POLNQ7Z5Q5 900 aa20.03■□□□□ 0.8
LSM4-203ENST00000593829 ARHGEF2Q92974 986 aaKnown RBP20.03■□□□□ 0.8
LSM4-203ENST00000593829 ACE2Q9BYF1 805 aaPredicted RBP20.03■□□□□ 0.8
LSM4-203ENST00000593829 DMGDHQ9UI17 866 aaKnown RBP20.03■□□□□ 0.8
LSM4-203ENST00000593829 TTC34A8MYJ7 566 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 ERCC2P18074 760 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 ACVRL1P37023 503 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 CDH6P55285 790 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 YBEYP58557 167 aaPredicted RBP20.02■□□□□ 0.8
LSM4-203ENST00000593829 RETSATQ6NUM9 610 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 SPATS2Q86XZ4 545 aaKnown RBP20.02■□□□□ 0.8
LSM4-203ENST00000593829 UMODL1-AS1Q8N2C9 162 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 CALR3Q96L12 384 aaKnown RBP20.02■□□□□ 0.8
LSM4-203ENST00000593829 TPSD1Q9BZJ3 242 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 NOL6Q9H6R4 1146 aaKnown RBP20.02■□□□□ 0.8
LSM4-203ENST00000593829 PCDH18Q9HCL0 1135 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 PRSS16Q9NQE7 514 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 HS3ST2Q9Y278 367 aa20.02■□□□□ 0.8
LSM4-203ENST00000593829 EDDM13A0A1B0GTR0 161 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 BTNL10A8MVZ5 291 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 NDUFV2P19404 249 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 PAFAH1B1P43034 410 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 DPYSQ14117 519 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 ATP13A4Q4VNC1 1196 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 OR2T3Q8NH03 318 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 MRGPRX1Q96LB2 322 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 FBRSQ9HAH7 460 aa20.02■□□□□ 0.79
LSM4-203ENST00000593829 ATP9BO43861 1147 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 BUB1BO60566 1050 aaPredicted RBP20.01■□□□□ 0.79
LSM4-203ENST00000593829 ZMPSTE24O75844 475 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 GLDCP23378 1020 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 PARP15Q460N3 678 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 ACCSLQ4AC99 568 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 USP39Q53GS9 565 aaKnown RBP20.01■□□□□ 0.79
LSM4-203ENST00000593829 ZFYVE27Q5T4F4 411 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 LINGO4Q6UY18 593 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 MREGQ8N565 214 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 SH2D3CQ8N5H7 860 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 ATP11CQ8NB49 1132 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 KCTD6Q8NC69 237 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 CSPG4P5Q96PW8 444 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 MKRN2Q9H000 416 aaKnown RBP20.01■□□□□ 0.79
LSM4-203ENST00000593829 MTG2Q9H4K7 406 aa20.01■□□□□ 0.79
LSM4-203ENST00000593829 RCOR3Q9P2K3 495 aaPredicted RBP20.01■□□□□ 0.79
LSM4-203ENST00000593829 RASA4BC9J798 803 aa20■□□□□ 0.79
LSM4-203ENST00000593829 RASA4O43374 803 aa20■□□□□ 0.79
LSM4-203ENST00000593829 HRO43593 1189 aa20■□□□□ 0.79
LSM4-203ENST00000593829 SPOPO43791 374 aa20■□□□□ 0.79
LSM4-203ENST00000593829 MT-CO1P00395 513 aa20■□□□□ 0.79
LSM4-203ENST00000593829 COMTP21964 271 aa20■□□□□ 0.79
LSM4-203ENST00000593829 NDST2P52849 883 aa20■□□□□ 0.79
LSM4-203ENST00000593829 COPAP53621 1224 aa20■□□□□ 0.79
LSM4-203ENST00000593829 PDK2Q15119 407 aa20■□□□□ 0.79
LSM4-203ENST00000593829 TMPRSS6Q8IU80 811 aa20■□□□□ 0.79
LSM4-203ENST00000593829 MAP7D3Q8IWC1 876 aa20■□□□□ 0.79
LSM4-203ENST00000593829 GDAP1L1Q96MZ0 367 aa20■□□□□ 0.79
LSM4-203ENST00000593829 SEMA4AQ9H3S1 761 aa20■□□□□ 0.79
LSM4-203ENST00000593829 PRDM16Q9HAZ2 1276 aa20■□□□□ 0.79
LSM4-203ENST00000593829 SALL4Q9UJQ4 1053 aa20■□□□□ 0.79
LSM4-203ENST00000593829 ALG6Q9Y672 507 aa20■□□□□ 0.79
LSM4-203ENST00000593829 FAM169AQ9Y6X4 670 aa20■□□□□ 0.79
LSM4-203ENST00000593829 CXorf51AA0A1B0GTR3 108 aa20■□□□□ 0.79
LSM4-203ENST00000593829 SRRM3A6NNA2 597 aaPredicted RBP20■□□□□ 0.79
LSM4-203ENST00000593829 SIN3BO75182 1162 aa20■□□□□ 0.79
LSM4-203ENST00000593829 RPP40O75818 363 aaKnown RBP20■□□□□ 0.79
LSM4-203ENST00000593829 SRCP12931 536 aa20■□□□□ 0.79
LSM4-203ENST00000593829 CCT5P48643 541 aa20■□□□□ 0.79
LSM4-203ENST00000593829 ARSEP51690 589 aa20■□□□□ 0.79
LSM4-203ENST00000593829 GTF2A1P52655 376 aaPredicted RBP20■□□□□ 0.79
LSM4-203ENST00000593829 NAP1L1P55209 391 aaKnown RBP20■□□□□ 0.79
LSM4-203ENST00000593829 DLG2Q15700 870 aa20■□□□□ 0.79
LSM4-203ENST00000593829 SWT1Q5T5J6 900 aaKnown RBP20■□□□□ 0.79
LSM4-203ENST00000593829 C9orf64Q5T6V5 341 aa20■□□□□ 0.79
LSM4-203ENST00000593829 LRRC38Q5VT99 294 aa20■□□□□ 0.79
LSM4-203ENST00000593829 ZNF354CQ86Y25 554 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms