RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DEUP1Q05D60 604 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 BECN1Q14457 450 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 TMEM259Q4ZIN3 620 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 ARSIQ5FYB1 569 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 ERN2Q76MJ5 926 aaKnown RBP16.72■□□□□ 0.27
LIG1-205ENST00000593425 ABI3BPQ7Z7G0 1075 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 SETD3Q86TU7 594 aaPredicted RBP16.72■□□□□ 0.27
LIG1-205ENST00000593425 ERICH1Q86X53 443 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 ZDHHC17Q8IUH5 632 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 FGF11Q92914 225 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 NT5C3BQ969T7 300 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 PGAP3Q96FM1 320 aaPredicted RBP16.72■□□□□ 0.27
LIG1-205ENST00000593425 TBCBQ99426 244 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 DYRK4Q9NR20 520 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 RRN3Q9NYV6 651 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 IL36AQ9UHA7 158 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 WASF2Q9Y6W5 498 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 IGLV3-10A0A075B6K4 115 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 ATXN7O15265 892 aaPredicted RBP16.71■□□□□ 0.27
LIG1-205ENST00000593425 LEFTY1O75610 366 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 ENDOD1O94919 500 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 PCDH8O95206 1070 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 SNX16P57768 344 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 E2F1Q01094 437 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 CCDC173Q0VFZ6 552 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 TBC1D25Q3MII6 688 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 ZNF542PQ5EBM4 170 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 TRNP1Q6NT89 227 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 DPY19L2P1Q6NXN4 242 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 LRRC31Q6UY01 552 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 DPY19L3Q6ZPD9 716 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 FAM71AQ8IYT1 594 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 SLC39A7Q92504 469 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 APOLD1Q96LR9 279 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 HDAC8Q9BY41 377 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 KIAA1468Q9P260 1216 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 ZNF212Q9UDV6 495 aa16.71■□□□□ 0.27
LIG1-205ENST00000593425 LY6G6EA0A0G2JKS1 128 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 CKMT1AP12532 417 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 OR1E1P30953 314 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 CDH5P33151 784 aaPredicted RBP16.7■□□□□ 0.26
LIG1-205ENST00000593425 ACTN2P35609 894 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 FLT3P36888 993 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
LIG1-205ENST00000593425 GABRB2P47870 512 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 ARF5P84085 180 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 CCDC15Q0P6D6 951 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 FGL2Q14314 439 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 CAMK4Q16566 473 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 HS1BP3Q53T59 392 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 C2CD6Q53TS8 623 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 FAM102AQ5T9C2 384 aaPredicted RBP16.7■□□□□ 0.26
LIG1-205ENST00000593425 CDCP2Q5VXM1 449 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 XYLT1Q86Y38 959 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 SPACA3Q8IXA5 215 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 BMFQ96LC9 184 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 C1orf74Q96LT6 269 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 GPR27Q9NS67 375 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 ACTL7AQ9Y615 435 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 U3KQA8 63 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 TRPM6Q9BX84 2022 aa16.7■□□□□ 0.26
LIG1-205ENST00000593425 BPTFQ12830 3046 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 POM121BA6NF01 834 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 A6NNZ2 444 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 RAD51BO15315 384 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 OPA1O60313 960 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 SRGAP2O75044 1071 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 ZMPSTE24O75844 475 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 NEBLO76041 1014 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 ZIC2O95409 532 aaPredicted RBP16.69■□□□□ 0.26
LIG1-205ENST00000593425 F9P00740 461 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 ADRB3P13945 408 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 RECQLP46063 649 aaPredicted RBP16.69■□□□□ 0.26
LIG1-205ENST00000593425 SERPINH1P50454 418 aaKnown RBP16.69■□□□□ 0.26
LIG1-205ENST00000593425 NEK3P51956 506 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 TLE3Q04726 772 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
LIG1-205ENST00000593425 SLC25A52Q3SY17 297 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 SMYD5Q6GMV2 418 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 Q6ZSR6 202 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
LIG1-205ENST00000593425 TMEM35BQ8NCS4 154 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 C18orf8Q96DM3 657 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 PPP1R16AQ96I34 528 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 SPON2Q9BUD6 331 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 DNAJC28Q9NX36 388 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 NLGN3Q9NZ94 848 aa16.69■□□□□ 0.26
LIG1-205ENST00000593425 ILVBLA1L0T0 632 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 K7ESM1 405 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 TK2O00142 265 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 MPOP05164 745 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 CYP11B1P15538 503 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 ITGB7P26010 798 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 SCNN1AP37088 669 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 C19orf57Q0VDD7 668 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 FZD2Q14332 565 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 MAN2A1Q16706 1144 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 RETSATQ6NUM9 610 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms