RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 HOXB3P14651 431 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-243ENST00000593128 HNF1BP35680 557 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 CLCN6P51797 869 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 CDR2Q01850 454 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 GNA12Q03113 381 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 MAPK8IP2Q13387 824 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-243ENST00000593128 COL28A1Q2UY09 1125 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 DPY19L3Q6ZPD9 716 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 ERN2Q76MJ5 926 aaKnown RBP18.32■□□□□ 0.52
CIRBP-243ENST00000593128 HORMAD1Q86X24 394 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 TMIEQ8NEW7 156 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 RXFP2Q8WXD0 754 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 PPP1R16AQ96I34 528 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 SEPT11Q9NVA2 429 aaKnown RBP18.32■□□□□ 0.52
CIRBP-243ENST00000593128 GPSM3Q9Y4H4 160 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 ACTL7AQ9Y615 435 aa18.32■□□□□ 0.52
CIRBP-243ENST00000593128 IGLV3-10A0A075B6K4 115 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 ILVBLA1L0T0 632 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 FFAR2O15552 330 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 SDC4P31431 198 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 AKT2P31751 481 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 ACADVLP49748 655 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 SERPINH1P50454 418 aaKnown RBP18.31■□□□□ 0.52
CIRBP-243ENST00000593128 CLDN2P57739 230 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 KRT31Q15323 416 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 ARL13BQ3SXY8 428 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 ACBD5Q5T8D3 534 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-243ENST00000593128 SEL1L3Q68CR1 1132 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 IQCHQ86VS3 1027 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 TMPRSS12Q86WS5 348 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 ZNF677Q86XU0 584 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 ZNF354CQ86Y25 554 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 PDCD7Q8N8D1 485 aaKnown RBP18.31■□□□□ 0.52
CIRBP-243ENST00000593128 OR6K2Q8NGY2 324 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 DCBLD2Q96PD2 775 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 TM6SF2Q9BZW4 377 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 ZDHHC6Q9H6R6 413 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 DNAI1Q9UI46 699 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 NOCTQ9UK39 431 aaKnown RBP18.31■□□□□ 0.52
CIRBP-243ENST00000593128 PCDHGA1Q9Y5H4 931 aa18.31■□□□□ 0.52
CIRBP-243ENST00000593128 GOLGA4Q13439 2230 aaKnown RBP18.31■□□□□ 0.52
CIRBP-243ENST00000593128 PKD1L2Q7Z442 2459 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 DSPP15924 2871 aaKnown RBP18.3■□□□□ 0.52
CIRBP-243ENST00000593128 FAM208BQ5VWN6 2430 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 EPHB6O15197 1021 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 SOX5P35711 763 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 ACVRL1P37023 503 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 RXRGP48443 463 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 ARF5P84085 180 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 FMO1Q01740 532 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 OVGP1Q12889 678 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 ZNF284Q2VY69 593 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 HS1BP3Q53T59 392 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 HES3Q5TGS1 186 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 FBXL19Q6PCT2 694 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 ZNF783Q6ZMS7 281 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 PTAR1Q7Z6K3 402 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-243ENST00000593128 JOSD2Q8TAC2 188 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 ENOX1Q8TC92 643 aaKnown RBP18.3■□□□□ 0.52
CIRBP-243ENST00000593128 GPT2Q8TD30 523 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 CAAP1Q9H8G2 361 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 FANCLQ9NW38 375 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 TMEM51Q9NW97 253 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 OR12D3Q9UGF7 316 aa18.3■□□□□ 0.52
CIRBP-243ENST00000593128 TDRD6O60522 2096 aaKnown RBP18.3■□□□□ 0.52
CIRBP-243ENST00000593128 CHRNB2P17787 502 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 HNRNPA2B1P22626 353 aaKnown RBP18.29■□□□□ 0.52
CIRBP-243ENST00000593128 STAT1P42224 750 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 NSFP46459 744 aaKnown RBP18.29■□□□□ 0.52
CIRBP-243ENST00000593128 CCNHP51946 323 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-243ENST00000593128 NEK3P51956 506 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 DAB2P98082 770 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 CAMK2BQ13554 666 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 SYCP1Q15431 976 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 CCDC14Q49A88 953 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 CARD16Q5EG05 197 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 CT47A1Q5JQC4 288 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-243ENST00000593128 SFMBT2Q5VUG0 894 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 NEK5Q6P3R8 708 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 PCDH20Q8N6Y1 951 aaKnown RBP18.29■□□□□ 0.52
CIRBP-243ENST00000593128 OR13H1Q8NG92 308 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 LRIG1Q96JA1 1093 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 HEPHQ9BQS7 1158 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 SELENOOQ9BVL4 669 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 HDAC8Q9BY41 377 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 CEP44Q9C0F1 390 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 ZFR2Q9UPR6 939 aaKnown RBP18.29■□□□□ 0.52
CIRBP-243ENST00000593128 AK5Q9Y6K8 562 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 WASF2Q9Y6W5 498 aa18.29■□□□□ 0.52
CIRBP-243ENST00000593128 NBEAQ8NFP9 2946 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 SIGLEC6O43699 453 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 ZMPSTE24O75844 475 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 CYP1A1P04798 512 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-243ENST00000593128 C1SP09871 688 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 ADRB3P13945 408 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 CKMT2P17540 419 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 MMP8P22894 467 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 GKP32189 559 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 ADRA1BP35368 520 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms