RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 TBR1Q16650 682 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 NEK5Q6P3R8 708 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 C14orf80Q86SX3 495 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 GRIN3AQ8TCU5 1115 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 GRAMD1AQ96CP6 724 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 BTN2A3PQ96KV6 586 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 PSMB7Q99436 277 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 CCDC3Q9BQI4 270 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 BOCQ9BWV1 1114 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 SLC25A13Q9UJS0 675 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 SPENQ96T58 3664 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 SYNJ2BP-COX16A0A087WUM0 186 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 TCAF2A6NFQ2 919 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 KCNU1A8MYU2 1149 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 PLD2O14939 933 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 TCEA3O75764 348 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 ENDOD1O94919 500 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 FBXO21O94952 628 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 GJB6O95452 261 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 PFKFB1P16118 471 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 JUNDP17535 347 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 RPL13P26373 211 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 UGT1A5P35504 534 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 PDE1CQ14123 709 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 UBAP2LQ14157 1087 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 TCEA2Q15560 299 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 IGFBP7Q16270 282 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 CNGA2Q16280 664 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 TCERG1LQ5VWI1 586 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 HIST2H2BCQ6DN03 193 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 LINGO4Q6UY18 593 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 KYAT3Q6YP21 454 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 NYAP1Q6ZVC0 841 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 ERN2Q76MJ5 926 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 PARGQ86W56 976 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 PTRH1Q86Y79 214 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 JAMLQ86YT9 394 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 HSFY1Q96LI6 401 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 KLF6Q99612 283 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 SLC17A9Q9BYT1 436 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 TNKS2Q9H2K2 1166 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 EPB41L5Q9HCM4 733 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 ST7Q9NRC1 585 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 COX16Q9P0S2 106 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 VPS28Q9UK41 221 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 VANGL2Q9ULK5 521 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 PCDHB4Q9Y5E5 795 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 HS3ST3A1Q9Y663 406 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 CSNK1G3Q9Y6M4 447 aa13.07□□□□□ -0.32
PRKCSH-210ENST00000589990 NTN3O00634 580 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 CNTN5O94779 1100 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 ITGB2P05107 769 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 PAEPP09466 180 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 RPL34P49207 117 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 ADKP55263 362 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 AUHQ13825 339 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 SPIDRQ14159 915 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 SKIDA1Q1XH10 827 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 DENND1BQ6P3S1 775 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 FBXO39Q8N4B4 442 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 RPRD1AQ96P16 312 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 LRRC61Q9BV99 259 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 CLPBQ9H078 707 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 EVA1BQ9NVM1 165 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 HS3ST2Q9Y278 367 aa13.06□□□□□ -0.32
PRKCSH-210ENST00000589990 H3BM21 787 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 ZNF821O75541 412 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 LEFTY1O75610 366 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 NTRK1P04629 796 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 GP1BBP13224 206 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 ITIH1P19827 911 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 MLLT3P42568 568 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 GPD2P43304 727 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 DPYDQ12882 1025 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 PRRT3Q5FWE3 981 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 RAB11FIP2Q7L804 512 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 ZFAND4Q86XD8 727 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 ATP11CQ8NB49 1132 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 TMIEQ8NEW7 156 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 TPCN2Q8NHX9 752 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 LIN37Q96GY3 246 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 FUCA2Q9BTY2 467 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 HDAC8Q9BY41 377 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 EPN3Q9H201 632 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 PISDQ9UG56 409 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 VPS51Q9UID3 782 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 ITM2BQ9Y287 266 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 PCDHGA7Q9Y5G6 932 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 FADS3Q9Y5Q0 445 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms