RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 HOXA6P31267 233 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 SLC25A11Q02978 314 aaKnown RBP17.96■□□□□ 0.47
DNMT1-215ENST00000588913 ZNF177Q13360 481 aaPredicted RBP17.96■□□□□ 0.47
DNMT1-215ENST00000588913 SMTNL2Q2TAL5 461 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 ARL13BQ3SXY8 428 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 FAM153CQ494X1 144 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 HSF5Q4G112 596 aaPredicted RBP17.96■□□□□ 0.47
DNMT1-215ENST00000588913 P3H4Q92791 437 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 CTTNBP2NLQ9P2B4 639 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 PPARGC1AQ9UBK2 798 aaKnown RBP17.96■□□□□ 0.47
DNMT1-215ENST00000588913 FAM153AQ9UHL3 310 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 AP4E1Q9UPM8 1137 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 ERVW-1Q9UQF0 538 aa17.96■□□□□ 0.47
DNMT1-215ENST00000588913 ZFHX2Q9C0A1 2572 aaPredicted RBP17.95■□□□□ 0.46
DNMT1-215ENST00000588913 GOLGA6L10A0A0M3HER8 536 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 TTC34A8MYJ7 566 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 FSBPO95073 299 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 MT-CO1P00395 513 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 NDUFV2P19404 249 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 L1CAMP32004 1257 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 PLK1P53350 603 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 COPAP53621 1224 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 TAS2R40P59535 323 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 MTA1Q13330 715 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 CEP85LQ5SZL2 805 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 RWDD4Q6NW29 188 aaKnown RBP17.95■□□□□ 0.46
DNMT1-215ENST00000588913 NUDT18Q6ZVK8 323 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 TAX1BP1Q86VP1 789 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 PACS2Q86VP3 889 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 WDR5BQ86VZ2 330 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 LONP2Q86WA8 852 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 KLHL7Q8IXQ5 586 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 NIPA2Q8N8Q9 360 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 HMGB4Q8WW32 186 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 RLN3Q8WXF3 142 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 HES6Q96HZ4 224 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 MKRN2Q9H000 416 aaKnown RBP17.95■□□□□ 0.46
DNMT1-215ENST00000588913 CNOT10Q9H9A5 744 aaKnown RBP17.95■□□□□ 0.46
DNMT1-215ENST00000588913 USP18Q9UMW8 372 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 MFHAS1Q9Y4C4 1052 aa17.95■□□□□ 0.46
DNMT1-215ENST00000588913 CREB3O43889 395 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 RHOCP08134 193 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 ACVRL1P37023 503 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 DGKEP52429 567 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 ATP13A4Q4VNC1 1196 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 FNDC3BQ53EP0 1204 aaKnown RBP17.94■□□□□ 0.46
DNMT1-215ENST00000588913 EFHC2Q5JST6 749 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 SERPINA13PQ6UXR4 307 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 CACUL1Q86Y37 369 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 CAMKK1Q8N5S9 505 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 FAM160A2Q8N612 972 aaPredicted RBP17.94■□□□□ 0.46
DNMT1-215ENST00000588913 SLC35G2Q8TBE7 412 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 CTNNBL1Q8WYA6 563 aaPredicted RBP17.94■□□□□ 0.46
DNMT1-215ENST00000588913 RFFLQ8WZ73 363 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 TBC1D31Q96DN5 1066 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 DHX35Q9H5Z1 703 aaKnown RBP17.94■□□□□ 0.46
DNMT1-215ENST00000588913 EBF1Q9UH73 591 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 ABCA7Q8IZY2 2146 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 NUP205Q92621 2012 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 PLXND1Q9Y4D7 1925 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 FAM187AA6NFU0 413 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 AXIN1O15169 862 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 TIMM44O43615 452 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 OR1E1P30953 314 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 CTNNA1P35221 906 aaKnown RBP17.94■□□□□ 0.46
DNMT1-215ENST00000588913 HSD17B3P37058 310 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 ERMARDQ5T6L9 678 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 ASCL5Q7RTU5 278 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 TRMT11Q7Z4G4 463 aaKnown RBP17.94■□□□□ 0.46
DNMT1-215ENST00000588913 SUMF1Q8NBK3 374 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 UCMAQ8WVF2 138 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 KLC2Q9H0B6 622 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 CARD9Q9H257 536 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 ZWILCHQ9H900 591 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 TMEM248Q9NWD8 314 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 PCDHGA2Q9Y5H1 932 aa17.94■□□□□ 0.46
DNMT1-215ENST00000588913 K7ERQ8 282 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 ZMPSTE24O75844 475 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 EPHX1P07099 455 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 RARAP10276 462 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 RHOQP17081 205 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 GOT1P17174 413 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 BCKDHBP21953 392 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 PCK1P35558 622 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 ECT2LQ008S8 904 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 TCEAL1Q15170 157 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 LPAL2Q16609 132 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 LINGO4Q6UY18 593 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 NT5DC3Q86UY8 548 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 TP53INP2Q8IXH6 220 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 MRGPRX1Q96LB2 322 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 RUNDC3BQ96NL0 473 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 FAM129AQ9BZQ8 928 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 PRSS16Q9NQE7 514 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 IP6K2Q9UHH9 426 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 VPS51Q9UID3 782 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 VPS28Q9UK41 221 aa17.93■□□□□ 0.46
DNMT1-215ENST00000588913 ESYT3A0FGR9 886 aa17.92■□□□□ 0.46
DNMT1-215ENST00000588913 TMEM110-MUSTN1A8MSY1 372 aa17.92■□□□□ 0.46
DNMT1-215ENST00000588913 SMAD6O43541 496 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms