RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SHBGP04278 402 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 CSKP41240 450 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 SARNPP82979 210 aaKnown RBP26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 OLIG2Q13516 323 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 SPARCL1Q14515 664 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 CTC1Q2NKJ3 1217 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 LRRC8BQ6P9F7 803 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 GET4Q7L5D6 327 aaPredicted RBP26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 ANKMY2Q8IV38 441 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 IGDCC3Q8IVU1 814 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 SMARCD2Q92925 531 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 IRF7Q92985 503 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 TTC25Q96NG3 672 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 SLC25A51Q9H1U9 297 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 S1PR5Q9H228 398 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 LRRC4CQ9HCJ2 640 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 SPHK2Q9NRA0 654 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 UBP1Q9NZI7 540 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 WNT6Q9Y6F9 365 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 MYOFQ9NZM1 2061 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 TBX10O75333 385 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 NEBLO76041 1014 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 VIPR2P41587 438 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 ARF5P84085 180 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 DLX2Q07687 328 aaPredicted RBP26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 PRPSAP1Q14558 356 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 ADGRG2Q8IZP9 1017 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 FBXO36Q8NEA4 188 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 SH3GL2Q99962 352 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 AAR2Q9Y312 384 aaKnown RBP26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 MTCH2Q9Y6C9 303 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 TMEM265A0A087WTH1 108 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 CBX4O00257 560 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 MUSKO15146 869 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 CD160O95971 181 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 MT-CYBP00156 380 aaPredicted RBP26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 ELK3P41970 407 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 ZNF844Q08AG5 666 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 GRIN2CQ14957 1233 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 CCDC38Q502W7 563 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 PYROXD1Q8WU10 500 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 IMP4Q96G21 291 aaKnown RBP26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 LMLNQ96KR4 655 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 SIGLEC10Q96LC7 697 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 PPP1R2P1Q96PQ5 205 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 LRRC40Q9H9A6 602 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 TRPV4Q9HBA0 871 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 UBA2Q9UBT2 640 aaPredicted RBP26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 VPS28Q9UK41 221 aa26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.47■■□□□ 1.83
SCAMP4-210ENST00000588555 SNAP91O60641 907 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 ANXA9O76027 345 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 ABHD2P08910 425 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 MAXP61244 160 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 LMAN2Q12907 356 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 RFTN1Q14699 578 aaPredicted RBP26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 PRPF39Q86UA1 669 aaKnown RBP26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 DCAF4L2Q8NA75 395 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 UHMK1Q8TAS1 419 aaKnown RBP26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 LRRC39Q96DD0 335 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 CHMP2BQ9UQN3 213 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 DOCK8Q8NF50 2099 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 SLC9A3R1O14745 358 aaPredicted RBP26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 USP12O75317 370 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 SYF2O95926 243 aaKnown RBP26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 GPX6P59796 221 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 NIPAL4Q0D2K0 466 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 ADGRE1Q14246 886 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 DNAJC21Q5F1R6 531 aaKnown RBP26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 LY6G5CQ5SRR4 150 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 ALG1LQ6GMV1 187 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 ARRDC2Q8TBH0 407 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 PSKH2Q96QS6 385 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 RUFY1Q96T51 708 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 MARK1Q9P0L2 795 aa26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 KIAA1522Q9P206 1035 aaPredicted RBP26.46■■□□□ 1.83
SCAMP4-210ENST00000588555 GOLGA6CA6NDK9 693 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 PSMD3O43242 534 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 MMP2P08253 660 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 GOLGA6DP0CG33 693 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 POU3F3P20264 500 aaPredicted RBP26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 FCARP24071 287 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 CD70P32970 193 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 EIF3BP55884 814 aaKnown RBP26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 ZNF235Q14590 738 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 IHHQ14623 411 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 APCDD1Q8J025 514 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 TADA1Q96BN2 335 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 BBS2Q9BXC9 721 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 CASS4Q9NQ75 786 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 GOLGA6AQ9NYA3 693 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 VPS51Q9UID3 782 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 CDH7Q9ULB5 785 aa26.45■■□□□ 1.82
SCAMP4-210ENST00000588555 NEDD8-MDP1E9PL57 170 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 H3BQF6 201 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 GEMP55040 296 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 COL19A1Q14993 1142 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 CCDC117Q8IWD4 279 aaPredicted RBP26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 MPP5Q8N3R9 675 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms