RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 SHC3Q92529 594 aa15.5■□□□□ 0.07
HDAC5-206ENST00000587776 PSMB7Q99436 277 aa15.5■□□□□ 0.07
HDAC5-206ENST00000587776 PDCL3Q9H2J4 239 aa15.5■□□□□ 0.07
HDAC5-206ENST00000587776 TNKS2Q9H2K2 1166 aa15.5■□□□□ 0.07
HDAC5-206ENST00000587776 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.5■□□□□ 0.07
HDAC5-206ENST00000587776 NLGN3Q9NZ94 848 aa15.5■□□□□ 0.07
HDAC5-206ENST00000587776 PAXBP1Q9Y5B6 917 aa15.5■□□□□ 0.07
HDAC5-206ENST00000587776 SMAD6O43541 496 aaKnown RBP15.49■□□□□ 0.07
HDAC5-206ENST00000587776 OPA1O60313 960 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 C1QL1O75973 258 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 ENDOD1O94919 500 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 MPOP05164 745 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 OR1E1P30953 314 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 DUSP3P51452 185 aaPredicted RBP15.49■□□□□ 0.07
HDAC5-206ENST00000587776 CLCN6P51797 869 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 NEK3P51956 506 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 GABREP78334 506 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 DEUP1Q05D60 604 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 C5orf22Q49AR2 442 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 PTPN20Q4JDL3 420 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 ZNF542PQ5EBM4 170 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 ARSIQ5FYB1 569 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 SEL1L3Q68CR1 1132 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 GCNT7Q6ZNI0 430 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 SETD3Q86TU7 594 aaPredicted RBP15.49■□□□□ 0.07
HDAC5-206ENST00000587776 CHST14Q8NCH0 376 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 LSM14AQ8ND56 463 aaKnown RBP15.49■□□□□ 0.07
HDAC5-206ENST00000587776 APOLD1Q96LR9 279 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 OSBPL2Q9H1P3 480 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 PLCB1Q9NQ66 1216 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 ARHGEF38Q9NXL2 777 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 ZFR2Q9UPR6 939 aaKnown RBP15.49■□□□□ 0.07
HDAC5-206ENST00000587776 SNX10Q9Y5X0 201 aa15.49■□□□□ 0.07
HDAC5-206ENST00000587776 A0A0D9SEW6 157 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 H3BM21 787 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 USP12O75317 370 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 CSO75390 466 aaKnown RBP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 LEFTY1O75610 366 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 MYF5P13349 255 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 MTIF2P46199 727 aaKnown RBP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 DNA2P51530 1060 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 HNRNPKP61978 463 aaKnown RBP eCLIP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 TAF1BQ53T94 588 aaPredicted RBP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 Q6ZSR6 202 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 DCP2Q8IU60 420 aaKnown RBP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 ZDHHC17Q8IUH5 632 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 SLC22A18ASQ8N1D0 253 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 ZNF397Q8NF99 534 aaPredicted RBP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 FAM174AQ8TBP5 190 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 IFT43Q96FT9 208 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 ZNF578Q96N58 590 aaPredicted RBP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 NPY6RQ99463 290 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 SPON2Q9BUD6 331 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 DUSP23Q9BVJ7 150 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 HDAC8Q9BY41 377 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 MPP6Q9NZW5 540 aa15.48■□□□□ 0.07
HDAC5-206ENST00000587776 IPO11Q9UI26 975 aaKnown RBP15.48■□□□□ 0.07
HDAC5-206ENST00000587776 FAM170AA1A519 330 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 SCAMP1O15126 338 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 SRGAP2O75044 1071 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 NEBLO76041 1014 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 F9P00740 461 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 GP1BAP07359 652 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 TFE3P19532 575 aaPredicted RBP15.47■□□□□ 0.07
HDAC5-206ENST00000587776 CXCR3P49682 368 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 TMPRSS3P57727 454 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 RPS21P63220 83 aaKnown RBP15.47■□□□□ 0.07
HDAC5-206ENST00000587776 FAM102AQ5T9C2 384 aaPredicted RBP15.47■□□□□ 0.07
HDAC5-206ENST00000587776 OTUD1Q5VV17 481 aaPredicted RBP15.47■□□□□ 0.07
HDAC5-206ENST00000587776 KIAA1161Q6NSJ0 714 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 RETSATQ6NUM9 610 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 DPY19L3Q6ZPD9 716 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 ABI3BPQ7Z7G0 1075 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 ZNF605Q86T29 641 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 SLC47A2Q86VL8 602 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 LSMEM2Q8N112 164 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 OR7D4Q8NG98 312 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 IFI44Q8TCB0 444 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 MAPK15Q8TD08 544 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 FEM1CQ96JP0 617 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 TBCBQ99426 244 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 SLC17A9Q9BYT1 436 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 CAAP1Q9H8G2 361 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 USP29Q9HBJ7 922 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 ATP13A1Q9HD20 1204 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 RWDD2AQ9UIY3 292 aa15.47■□□□□ 0.07
HDAC5-206ENST00000587776 K7ESM1 405 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 RNF103O00237 685 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 PNMA6AP0CW24 399 aaPredicted RBP15.46■□□□□ 0.07
HDAC5-206ENST00000587776 ADRB3P13945 408 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 ITGB7P26010 798 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 PON1P27169 355 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 UCNP55089 124 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 TPD52L1Q16890 204 aaPredicted RBP15.46■□□□□ 0.07
HDAC5-206ENST00000587776 TMEM259Q4ZIN3 620 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 ACBD5Q5T8D3 534 aaPredicted RBP15.46■□□□□ 0.07
HDAC5-206ENST00000587776 CDCP2Q5VXM1 449 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 KYAT3Q6YP21 454 aaKnown RBP15.46■□□□□ 0.07
HDAC5-206ENST00000587776 PARGQ86W56 976 aa15.46■□□□□ 0.07
HDAC5-206ENST00000587776 TMEM35BQ8NCS4 154 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms