RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 MARK4Q96L34 752 aa16.71■□□□□ 0.27
RANBP3-209ENST00000587411 GPR22Q99680 433 aa16.71■□□□□ 0.27
RANBP3-209ENST00000587411 CEP41Q9BYV8 373 aa16.71■□□□□ 0.27
RANBP3-209ENST00000587411 FAM49BQ9NUQ9 324 aa16.71■□□□□ 0.27
RANBP3-209ENST00000587411 PAIP2BQ9ULR5 123 aaKnown RBP16.71■□□□□ 0.27
RANBP3-209ENST00000587411 COL11A1P12107 1806 aaPredicted RBP16.71■□□□□ 0.27
RANBP3-209ENST00000587411 TRIM24O15164 1050 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 CSPG5O95196 566 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 COL6A2P12110 1019 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 CCR10P46092 362 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 STT3AP46977 705 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 ITGA7Q13683 1181 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 SPIDRQ14159 915 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 C16orf72Q14CZ0 275 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 MTX3Q5HYI7 312 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 PPP4R4Q6NUP7 873 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 PID1Q7Z2X4 250 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 ISOC1Q96CN7 298 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 SCYL1Q96KG9 808 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 CASS4Q9NQ75 786 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 ARHGEF38Q9NXL2 777 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 SLC39A10Q9ULF5 831 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 FZD10Q9ULW2 581 aa16.71■□□□□ 0.26
RANBP3-209ENST00000587411 SBK3P0C264 359 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 CLVS1Q8IUQ0 354 aaPredicted RBP16.7■□□□□ 0.26
RANBP3-209ENST00000587411 PACRGLQ8N7B6 248 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 ANKRD52Q8NB46 1076 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 ADAMTS16Q8TE57 1224 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 LPGAT1Q92604 370 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 SLC29A1Q99808 456 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 TBC1D23Q9NUY8 699 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 HES2Q9Y543 173 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 ERI2A8K979 691 aaKnown RBP16.7■□□□□ 0.26
RANBP3-209ENST00000587411 KCNU1A8MYU2 1149 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 E7ENX8 843 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 NPHS1O60500 1241 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 JUNP05412 331 aaKnown RBP16.7■□□□□ 0.26
RANBP3-209ENST00000587411 TGFB3P10600 412 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 CYP2C9P11712 490 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 HMOX2P30519 316 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 GTF2A2P52657 109 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 SLC10A6Q3KNW5 377 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 NHSL2Q5HYW2 709 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 ZBTB49Q6ZSB9 765 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 ACOT1Q86TX2 421 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 PYROXD2Q8N2H3 581 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 PELI3Q8N2H9 469 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 DNAAF3Q8N9W5 541 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 KDM1BQ8NB78 822 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 CHST13Q8NET6 341 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 SLCO4A1Q96BD0 722 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 LRRC4Q9HBW1 653 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 SPAG4Q9NPE6 437 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 DPP3Q9NY33 737 aa16.7■□□□□ 0.26
RANBP3-209ENST00000587411 KLHL8Q9P2G9 620 aaPredicted RBP16.7■□□□□ 0.26
RANBP3-209ENST00000587411 HEMK1Q9Y5R4 338 aaPredicted RBP16.7■□□□□ 0.26
RANBP3-209ENST00000587411 RLFQ13129 1914 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 TMEM221A6NGB7 291 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 CLASP2O75122 1294 aaKnown RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 STAMBPO95630 424 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 PORP16435 677 aaPredicted RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 ABCG1P45844 678 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 PLOD1Q02809 727 aaPredicted RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 SLC12A1Q13621 1099 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 GK5Q6ZS86 529 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 NT5DC4Q86YG4 428 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 PCDH20Q8N6Y1 951 aaKnown RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 GRIN3AQ8TCU5 1115 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 TFAP2CQ92754 450 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 MOCOSQ96EN8 888 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 ZNF668Q96K58 619 aaPredicted RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 CIB1Q99828 191 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 PCDHAC1Q9H158 963 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 MINDY3Q9H8M7 445 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 CNOT6Q9ULM6 557 aaKnown RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 SCAF8Q9UPN6 1271 aaKnown RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 KANSL1LA0AUZ9 987 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 SDHDO14521 159 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 BMP2P12643 396 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 IDO1P14902 403 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 NELFEP18615 380 aaKnown RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 FGFR3P22607 806 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 TTKP33981 857 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 NPY2RP49146 381 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 LRP8Q14114 963 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 PAFAH1B3Q15102 231 aaKnown RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 FAM187BQ17R55 369 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 HSDL1Q3SXM5 330 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 TERB1Q8NA31 727 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 FAM47BQ8NA70 645 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 RNF139Q8WU17 664 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 BORCS5Q969J3 196 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 MYOZ2Q9NPC6 264 aa16.69■□□□□ 0.26
RANBP3-209ENST00000587411 DUS2Q9NX74 493 aaKnown RBP16.69■□□□□ 0.26
RANBP3-209ENST00000587411 CACNA2D2Q9NY47 1150 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms