RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PRAMEF14Q5SWL7 426 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 FYB2Q5VWT5 728 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 SYDE1Q6ZW31 735 aaPredicted RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 ARCQ7LC44 396 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 HDXQ7Z353 690 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 RABEPKQ7Z6M1 372 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 CRYBG2Q8N1P7 616 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 EXD1Q8NHP7 514 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 GRK7Q8WTQ7 553 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 CYB5D2Q8WUJ1 264 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 TFAP2BQ92481 460 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 TSC1Q92574 1164 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 MS4A14Q96JA4 679 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 MCEEQ96PE7 176 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 FRMD8P1Q9BZ68 369 aaPredicted RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 CIPCQ9C0C6 399 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 GOLPH3Q9H4A6 298 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 VIPAS39Q9H9C1 493 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 CSNK1G1Q9HCP0 422 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 ITM2CQ9NQX7 267 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.06□□□□□ -1.12
VMP1-204ENST00000587259 TMEM51Q9NW97 253 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 THAP10Q9P2Z0 257 aaPredicted RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 LSM7Q9UK45 103 aaKnown RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 TSPAN16Q9UKR8 245 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 SCML2Q9UQR0 700 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 SNX11Q9Y5W9 270 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 GOLGA4Q13439 2230 aaKnown RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 TCRBV5S1A1TA0A578 114 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 TRABD2BA6NFA1 517 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 METTL12A8MUP2 240 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 SART1O43290 800 aaKnown RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 HEXIM1O94992 359 aaKnown RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 ZRANB2O95218 330 aaKnown RBP eCLIP8.05□□□□□ -1.12
VMP1-204ENST00000587259 PENKP01210 267 aaPredicted RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 EPHX1P07099 455 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 ACSL1P33121 698 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 PTPN7P35236 360 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 MATKP42679 507 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 GPD2P43304 727 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 NUMBP49757 651 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 PEX5P50542 639 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 SGSHP51688 502 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 VSNL1P62760 191 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 SLC14A1Q13336 389 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 STARD3Q14849 445 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 CYP1B1Q16678 543 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 GOLGA7BQ2TAP0 167 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 PTPN20Q4JDL3 420 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 PPP1R26Q5T8A7 1209 aaPredicted RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 DENND1BQ6P3S1 775 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 DHRS13Q6UX07 377 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 DNAAF5Q86Y56 855 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 SLC13A5Q86YT5 568 aaPredicted RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 DENND1CQ8IV53 801 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 RCOR2Q8IZ40 523 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 GOLGA6L1Q8N7Z2 621 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 ANKRD52Q8NB46 1076 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 C1orf216Q8TAB5 229 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 BAHD1Q8TBE0 780 aaPredicted RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 CCHCR1Q8TD31 782 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 DNASE2BQ8WZ79 361 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 SIPA1Q96FS4 1042 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 PIWIL1Q96J94 861 aaKnown RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 HSFY1Q96LI6 401 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 KRT12Q99456 494 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 FBXO44Q9H4M3 255 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 FAM114A2Q9NRY5 505 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 ASNSD1Q9NWL6 643 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 SUSD2Q9UGT4 822 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 PCYOX1Q9UHG3 505 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 DNMT3LQ9UJW3 386 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 FBXO10Q9UK96 956 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 AGO1Q9UL18 857 aaKnown RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 APOBEC2Q9Y235 224 aaKnown RBP8.05□□□□□ -1.12
VMP1-204ENST00000587259 EFR3BQ9Y2G0 817 aa8.05□□□□□ -1.12
VMP1-204ENST00000587259 URB1O60287 2271 aaKnown RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 H0Y8X5 98 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 TULP2O00295 520 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 XPO1O14980 1071 aaKnown RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 SYNCRIPO60506 623 aaKnown RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 ZNF189O75820 626 aaPredicted RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 TJP3O95049 919 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 FSBPO95073 299 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 GAS8O95995 478 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 PSMA2P25787 234 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 ITPKBP27987 946 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 PCK1P35558 622 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 DR1Q01658 176 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 HNRNPDQ14103 355 aaKnown RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 PREPLQ4J6C6 727 aaPredicted RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 BEND6Q5SZJ8 279 aaPredicted RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 FAM102AQ5T9C2 384 aaPredicted RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 CEP128Q6ZU80 1094 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 TMPRSS7Q7RTY8 843 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms