RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 STX17P56962 302 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 CETN1Q12798 172 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 PTPN20Q4JDL3 420 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 ARHGAP40Q5TG30 622 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 DPY19L3Q6ZPD9 716 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 Q6ZSR6 202 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 ERN2Q76MJ5 926 aaKnown RBP12.16□□□□□ -0.46
BRCA1-225ENST00000586385 PASD1Q8IV76 773 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 GRIN3AQ8TCU5 1115 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 SNRNP27Q8WVK2 155 aaKnown RBP12.16□□□□□ -0.46
BRCA1-225ENST00000586385 RNF34Q969K3 372 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 IFT43Q96FT9 208 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 PPP1R13BQ96KQ4 1090 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 TIGD1Q96MW7 591 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 DEPDC7Q96QD5 511 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 NPY6RQ99463 290 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-225ENST00000586385 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
BRCA1-225ENST00000586385 HDAC8Q9BY41 377 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 SIK2Q9H0K1 926 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 OSBPL2Q9H1P3 480 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 TNKS2Q9H2K2 1166 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 ARHGEF38Q9NXL2 777 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 CTNND2Q9UQB3 1225 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 ATP6V1DQ9Y5K8 247 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 COL6A6A6NMZ7 2263 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 DRGXA6NNA5 263 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 J3QKU1 62 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 SPINT1O43278 529 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 DAB1O75553 588 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 LEFTY1O75610 366 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 CD160O95971 181 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 NME1P15531 152 aaKnown RBP12.15□□□□□ -0.46
BRCA1-225ENST00000586385 SLC9A1P19634 815 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 CXCR3P49682 368 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 TMPRSS3P57727 454 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 ERVPABLB-1P60509 514 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 MORC3Q14149 939 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 LY6DQ14210 128 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 ISXQ2M1V0 245 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 GUSBP11Q6P575 273 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 C22orf39Q6P5X5 142 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 TRIM65Q6PJ69 517 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 SLC26A9Q7LBE3 791 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 DCAF4L2Q8NA75 395 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 C1orf131Q8NDD1 294 aaKnown RBP12.15□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF548Q8NEK5 533 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-225ENST00000586385 OR7D4Q8NG98 312 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 IFI44Q8TCB0 444 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 KCNE4Q8WWG9 221 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 SHC3Q92529 594 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 WBP1Q96G27 269 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 MUC3BQ9H195 1237 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 DNAJC28Q9NX36 388 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 MPP6Q9NZW5 540 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 PNMA8BQ9ULN7 279 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-225ENST00000586385 PCDHGC3Q9UN70 934 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.15□□□□□ -0.46
BRCA1-225ENST00000586385 HS3ST3A1Q9Y663 406 aa12.15□□□□□ -0.46
BRCA1-225ENST00000586385 IGLV3-10A0A075B6K4 115 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 SPTY2D1-AS1A0A0U1RR47 76 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 A6NNZ2 444 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 M0QYT0 321 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 KLK10O43240 276 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 ENDOD1O94919 500 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 PCDH8O95206 1070 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 CSF2P04141 144 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 PRNPP04156 253 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 RHOCP08134 193 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 KRT10P13645 584 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 PDX1P52945 283 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 RHDQ02161 417 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 STIM1Q13586 685 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 DRAP1Q14919 205 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 CDKN3Q16667 212 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 TAF1BQ53T94 588 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 TRNP1Q6NT89 227 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 KYAT3Q6YP21 454 aaKnown RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 PTAR1Q7Z6K3 402 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 TFAP2DQ7Z6R9 452 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 LSMEM2Q8N112 164 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 ZNF397Q8NF99 534 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 MAPK15Q8TD08 544 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 NT5C3BQ969T7 300 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 ATXN7L3BQ96GX2 97 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 C2orf49Q9BVC5 232 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 SRRTQ9BXP5 876 aaKnown RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 TKTL2Q9H0I9 626 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms