RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 STRNO43815 780 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GJA5P36382 358 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PPARGP37231 505 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CCR10P46092 362 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RAB27AP51159 221 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NAGLUP54802 743 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FOLH1Q04609 750 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CYLC2Q14093 348 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SNX17Q15036 470 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ARL13BQ3SXY8 428 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PIGGQ5H8A4 983 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NAPEPLDQ6IQ20 393 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FBXL19Q6PCT2 694 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 UGT2A3Q6UWM9 527 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SETD3Q86TU7 594 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ARRDC4Q8NCT1 418 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NLGN2Q8NFZ4 835 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PPP1R13LQ8WUF5 828 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 STYXQ8WUJ0 223 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 APBA2Q99767 749 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 COLEC11Q9BWP8 271 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DMAP1Q9NPF5 467 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ACSS2Q9NR19 701 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 VTI1BQ9UEU0 232 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZDHHC2Q9UIJ5 367 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PACSIN3Q9UKS6 424 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DTNAQ9Y4J8 743 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TARM1B6A8C7 271 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SLCO1B7G3V0H7 640 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PHGDHO43175 533 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DDHD2O94830 711 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FAM163BP0C2L3 166 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SLC35E2BP0CK96 405 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NCAM1P13591 858 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DNAJB2P25686 324 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LRPAP1P30533 357 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GRIA2P42262 883 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CHN2P52757 468 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SNAPC2Q13487 334 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 USP10Q14694 798 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZNF423Q2M1K9 1284 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 BNC2Q6ZN30 1099 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TMC7Q7Z402 723 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NUP205Q92621 2012 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PPP1R36Q96LQ0 422 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TSNARE1Q96NA8 513 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CDRT15Q96T59 188 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SGIP1Q9BQI5 828 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NUF2Q9BZD4 464 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CRTAC1Q9NQ79 661 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CNGB3Q9NQW8 809 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DDIT4Q9NX09 232 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 UBP1Q9NZI7 540 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 IPPQ9Y573 584 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SHROOM3Q8TF72 1996 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CAPN8A6NHC0 703 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DENRO43583 198 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 JCHAINP01591 159 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DNAJB1P25685 340 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 THOP1P52888 689 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RABGGTBP53611 331 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NSUN2Q08J23 767 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SLC12A1Q13621 1099 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TMEM126BQ8IUX1 230 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 KLHDC8BQ8IXV7 354 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CENPLQ8N0S6 344 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FSTL5Q8N475 847 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DNAJB3Q8WWF6 145 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 OR12D3Q9UGF7 316 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SLC4A7Q9Y6M7 1214 aa14.42□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AHSGP02765 367 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 COL6A2P12110 1019 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SAT1P21673 171 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GABRB3P28472 473 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GLRBP48167 497 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZNF135P52742 658 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PGGT1BP53609 377 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FLOT2Q14254 428 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PRPSAP1Q14558 356 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 HERC3Q15034 1050 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RAB41Q5JT25 222 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GPRIN1Q7Z2K8 1008 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LINC00523Q86TU6 105 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PGAM4Q8N0Y7 254 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LSMEM2Q8N112 164 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SMG8Q8ND04 991 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 KCTD4Q8WVF5 259 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GCNAQ96QF7 691 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 HAPLN3Q96S86 360 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 EPAS1Q99814 870 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SMOQ99835 787 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RUVBL2Q9Y230 463 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CDYLQ9Y232 598 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TXNDC9O14530 226 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CACNG3O60359 315 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 COQ9O75208 318 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 F2P00734 622 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 F9P00740 461 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 USP17L7P0C7H9 530 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 YBX3P16989 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms